Gene EcSMS35_4687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4687 
Symbol 
ID6143275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4785726 
End bp4787219 
Gene Length1494 bp 
Protein Length497 aa 
Translation table11 
GC content46% 
IMG OID641619503 
Producthypothetical protein 
Protein accessionYP_001746611 
Protein GI170682000 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0268272 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTACCAA TTAAACCCGT TTGTCTCGCA CTGGCTTTAT TTTCACTCAA TTCAATAGCC 
TGCTCCGGCG TACCATCTGC CTCTTTTTAT TACCAACCGT GGGGGCAAGG AACAAAATAT
ATTGTTGAAG ATAGCGATGG TTACGGACTC TATTTTCCGG ATATTCATTT ACCGCAGGTG
AGGTTCAAAC AACTGCGCCG TGTATCTGAC GGCACTGATG ATGAATATGA TTCTCCTGAT
GATATCAATA ATGATTTTGT GCGGGTGGAT GGTGGCGCTT ATATCAGAAC CAACGGTGGT
TGGCGTTTCG ACTGGTTGAC TGATGGCCGC CATATTTTAT GGGCAGGGAA AATAGTTCAG
AACCCGCCGG GAACACCGAA AGTCGATGCC GCAACATTCC GCGCATGGGG GCGTTTTGCT
GCCGATAAAG ACAGCCTCTA TTTTGATGGC GAACGCACGG ATGATAATCA CGGCGAAAAG
CAGGTCGATA TGGATTCGCT GCAACAGGTG GGGGGAAGGA TGAATTCACT TGATTCCGCG
GATGTGCTGA AAGATCGTCG CAATCTTTAC TTTCAGGGGC GCTGGTTAGG TAGTGCGCAA
GGGTATTCTA TTCTTGACAT TAAACCCTGG ACACGTCGTC CCATTATTTA TTCACCTAAT
AGCTGCGAAA GCAAAAGTAA TCCGGGACCC TGGGATACAA TCTGGCGGAC TAAATCGCAG
GTCTTTGTGA ATGGAGATGC CATCAACGCC GATCCGGATA CCTTTCATAT TGTGCGCTGG
ATAGCCGGTT CACTGCTAAT TTATCGCGAT AAAGACGGGG AGAAACGTTA TGCGTTCGGT
AAAAACTGCC GAAGTATATT TGACCTACAG CGGGATAAAG TAACCTGGAT GACGCGTGAT
GCTTCCAGGC GTGCTAATGA CTGCCGGGTT GCGACAATTC CTGATGTTGA TCCGGAATAT
TTTCGCCCGC TGACGGAGAA TGTGGCGCAA TATAAAGATT CGCTCTATCT GGTGAAATAT
ATATCTGCGG TCGAAAAAAC GCTGTCGGTC ATACATTTAC CAGACCCACA ACAAGAATTA
CAGAAAGGTG CTAATGTTGT AGGGAACAAA ATTTATTTCA TCGCGCGCGA TGATGTGACT
ATTTTTGATA TTAATGGGCA ATGGCAGTGG TATAAAAGCC CCGATGGCAC ACCATTAAAT
TATTTAGCAC ATGACGATCG CTATACGTAT TTTATTGATG AAGACACGGT TGAGCATTTT
GAACTGAAAG GCCAATGGAC GTGGTTTAAA TACGCCAATG GTCAATTATC AGATACCTTT
GCTCATGATG ACCACTATAT TTATTACGTA GGCGATGGGC TGGTACGTGA TGCGAAGCGG
CGTAATGAGA CTCGACAACT CGATGCGGCG CATCTTGATA AAAACGGCAG TTTGCTTACC
GTTGAAGGTA AGTACACCAG TTACAACAAT GAATTACTTC CACTGAATGA CTGA
 
Protein sequence
MLPIKPVCLA LALFSLNSIA CSGVPSASFY YQPWGQGTKY IVEDSDGYGL YFPDIHLPQV 
RFKQLRRVSD GTDDEYDSPD DINNDFVRVD GGAYIRTNGG WRFDWLTDGR HILWAGKIVQ
NPPGTPKVDA ATFRAWGRFA ADKDSLYFDG ERTDDNHGEK QVDMDSLQQV GGRMNSLDSA
DVLKDRRNLY FQGRWLGSAQ GYSILDIKPW TRRPIIYSPN SCESKSNPGP WDTIWRTKSQ
VFVNGDAINA DPDTFHIVRW IAGSLLIYRD KDGEKRYAFG KNCRSIFDLQ RDKVTWMTRD
ASRRANDCRV ATIPDVDPEY FRPLTENVAQ YKDSLYLVKY ISAVEKTLSV IHLPDPQQEL
QKGANVVGNK IYFIARDDVT IFDINGQWQW YKSPDGTPLN YLAHDDRYTY FIDEDTVEHF
ELKGQWTWFK YANGQLSDTF AHDDHYIYYV GDGLVRDAKR RNETRQLDAA HLDKNGSLLT
VEGKYTSYNN ELLPLND