| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4658 |
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| Symbol | |
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| ID | 6144078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 4759057 |
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| End bp | 4760682 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641619474 |
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| Product | isovaleryl CoA dehydrogenase |
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| Protein accession | YP_001746582 |
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| Protein GI | 170680540 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.61602 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCACTGGC AAACTCACAC CGTTTTTAAT CAACCTATAC CATTAAATAA CAGCAATTTA
TACCTGTCTG ATGGCGCGCT CTGCGAAGCG GTAACGCGTG AAGGTGCTGG CTGGGATAGC
GATTTTCTAG CCAGTATTGG TCAGCAGTTA GGGACGGCTG AATCCCTTGA ACTGGGGCGG
CTGGCGAATG TGAATCCGCC TGAATTATTG CGCTACGATG CGCAAGGACG CCGTCTGGAC
GATGTGCGTT TTCACCCCGC CTGGCACCTG CTGATGCAGG CGCTATGTAC CAATCGGGTG
CACAATCTTG CCTGGGAAGA AGACGCTCGC TCCGGCGCAT TTGTGGCGCG CGCGGCGCGT
TTTATGTTAC ATGCGCAGGT TGAGGCTGGG TCGTTATGTC CGATAACGAT GACCTTTGCC
GCCACGCCAT TGCTGTTACA GATGTTACCC GCGCCGTTTC AGGACTGGAC CACGCCGCTG
TTGAGCGATC GCTACGATTC TCACTTATTG CCAGGTGGGC AAAAACGCGG TTTGTTGATT
GGCATGGGAA TGACGGAAAA GCAGGGCGGT TCCGATGTCA TGAGCAACAC CACCCGCGCA
GAGCGCCTGG AAGATGGCTC TTATCGGCTG GTGGGGCATA AATGGTTTTT CTCGGTGCCG
CAAAGCGATG CGCATCTGGT GCTGGCGCAG ACTACGGGCG GTTTGTCCTG CTTTTTTGTG
CCGCGCTTTT TGCCTGACGG GCAACGCAAC GCGATTCGCC TCGAGCGGCT GAAAGATAAG
CTGGGTAATC GCTCTAACGC CAGCTGCGAA GTGGAGTTTC AGGATGCCAT TGGCTGGTTG
TTGGGGCAGG AAGGGGAAGG AATTCGTCTG ATCCTGAAAA TGGGTGGGAT GACGCGTTTT
GATTGCGCCC TGGGTAGCCA TGCCATGATG CGCCGTGCAT TTTCGCTGGC GATTTATCAT
GCACATCAAC GCCATGTTTT TGGTAATCCA TTGATCCAAC AGCCCCTTAT GCGTCATGTC
TTAAGTCGCA TGGCGCTTCA GCTTGAAGGG CAAACGGCGT TGCTGTTTCG TCTTGCGCGA
GCGTGGGACC GGCGTGCCGA TGCCAAAGAA GCTCTGTGGG CGCGTTTATT TACGCCTGCG
GCGAAATTTG TGATCTGCAA ACATGGTATT CCGTTTGTGG CCGAAGCGAT GGAGGTGCTG
GGCGGCATTG GTTATTGCGA GGAGAGCGAG CTGCCGCGGC TTTACCGGGA GATGCCGGTA
AACAGTATTT GGGAAGGTTC CGGCAATATT ATGTGCCTGG ATGTGCTGCG CGTTCTCAAT
AAGCAAGCGG GCGTATACGA CTTATTGTCG GAAGCATTTG TGGAAGTGAA AGGGCAGGAT
CGCTATTTTG ATCGCGCGGT TCGTCGTTTA CAGCAGCAGC TGCGTAAGCC AGCTGAAGAA
TTGGGGCGAG AGATTACTCA TCAGCTATTC CTGCTGGGCT GCGGTGCGCA AATGTTGAAA
TATGCCTCTC CGCCAATGGC GCAGGCGTGG TGTCAGGTGA TGTTAGATAC GCGCGGCGGC
GTACGGTTGT CAGAGCAGAT CCAGAATGAT TTATTGCTGC GGGCGACGGG AGGAGTGTGT
TTGTAA
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| Protein sequence | MHWQTHTVFN QPIPLNNSNL YLSDGALCEA VTREGAGWDS DFLASIGQQL GTAESLELGR
LANVNPPELL RYDAQGRRLD DVRFHPAWHL LMQALCTNRV HNLAWEEDAR SGAFVARAAR
FMLHAQVEAG SLCPITMTFA ATPLLLQMLP APFQDWTTPL LSDRYDSHLL PGGQKRGLLI
GMGMTEKQGG SDVMSNTTRA ERLEDGSYRL VGHKWFFSVP QSDAHLVLAQ TTGGLSCFFV
PRFLPDGQRN AIRLERLKDK LGNRSNASCE VEFQDAIGWL LGQEGEGIRL ILKMGGMTRF
DCALGSHAMM RRAFSLAIYH AHQRHVFGNP LIQQPLMRHV LSRMALQLEG QTALLFRLAR
AWDRRADAKE ALWARLFTPA AKFVICKHGI PFVAEAMEVL GGIGYCEESE LPRLYREMPV
NSIWEGSGNI MCLDVLRVLN KQAGVYDLLS EAFVEVKGQD RYFDRAVRRL QQQLRKPAEE
LGREITHQLF LLGCGAQMLK YASPPMAQAW CQVMLDTRGG VRLSEQIQND LLLRATGGVC
L
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