Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4632 |
Symbol | rsgA |
ID | 6147202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 4735118 |
End bp | 4736170 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641619448 |
Product | ribosome-associated GTPase |
Protein accession | YP_001746559 |
Protein GI | 170681485 |
COG category | [R] General function prediction only |
COG ID | [COG1162] Predicted GTPases |
TIGRFAM ID | [TIGR00157] ribosome small subunit-dependent GTPase A |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000257441 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.0538401 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGTAAAA ATAAACTCTC CAAAGGCCAG CAGCGCCGCG TGAACGCCAA TCACCAGCGT CGTCTTAAAA CGTCTAAGGA GAAGCCCGAC TACGACGACA ATCTGTTTGG CGAGCCTGAT GAAGGTATCG TCATCAGCCG CTTTGGTATG CACGCTGATG TGGAATCCGC AGATGGCGAC GTTCACCGCT GCAATATTCG CCGTACCATC CGTTCGCTGG TGACCGGCGA CCGCGTAGTC TGGCGTCCGG GTAAACCGGC GGCGGAAGGC GTAAATGTCA AAGGGATCGT GGAAGCGGTG CATGAGCGCA CTTCAGTGTT AACGCGCCCG GACTTCTACG ATGGCGTGAA ACCTATTGCC GCCAACATCG ACCAGATTGT CATTGTCTCC GCCATTTTGC CGGAGCTGTC GCTCAATATT ATCGACCGTT ACCTGGTGGC CTGCGAAACC TTGCAGATTG AGCCGATTAT TGTGCTCAAC AAAATAGACC TGCTGGACGA CGAAGGTATG AAGTTCGTCA ACGAGCAGAT GGACATCTAC CGCAATATCG GTTATCGCGT ATTGATGGTT TCCAGTCATA CACAGGATGG GCTGAAACCG CTGGAAGAGG CGTTGACCGG GCGCATCAGC ATTTTTGCCG GGCAGTCTGG CGTTGGCAAA TCCAGCCTGC TGAACGCGTT GCTGGGGCTG CAAAAAGAGA TCCTGACCAA CGATGTCTCT GACAACTCGG GGCTTGGTCA GCACACCACG ACCGCCGCTC GGCTGTATCA CTTCCCGCAC GGCGGTGATG TGATTGACTC CCCAGGAGTG CGTGAGTTCG GCCTCTGGCA CCTGGAGCCG GAACAAATCA CTCAGGGCTT TGTCGAATTC CATGACTATT TAGGTCTGTG TAAATATCGC GATTGCAAAC ACGATACCGA TCCGGGCTGC GCTATCCGGG AAGCGGTTGA GGAAGGGAAA ATCGCGGAAA CCCGTTTCGA AAACTATCAC CGTATTCTGG AAAGCATGGC GCAGGTAAAA ACGCGTAAAA ACTTTTCTGA TACGGATGAC TGA
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Protein sequence | MSKNKLSKGQ QRRVNANHQR RLKTSKEKPD YDDNLFGEPD EGIVISRFGM HADVESADGD VHRCNIRRTI RSLVTGDRVV WRPGKPAAEG VNVKGIVEAV HERTSVLTRP DFYDGVKPIA ANIDQIVIVS AILPELSLNI IDRYLVACET LQIEPIIVLN KIDLLDDEGM KFVNEQMDIY RNIGYRVLMV SSHTQDGLKP LEEALTGRIS IFAGQSGVGK SSLLNALLGL QKEILTNDVS DNSGLGQHTT TAARLYHFPH GGDVIDSPGV REFGLWHLEP EQITQGFVEF HDYLGLCKYR DCKHDTDPGC AIREAVEEGK IAETRFENYH RILESMAQVK TRKNFSDTDD
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