Gene EcSMS35_4587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4587 
Symbol 
ID6144866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4689892 
End bp4690521 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content55% 
IMG OID641619403 
Producthypothetical protein 
Protein accessionYP_001746515 
Protein GI170681045 
COG category[S] Function unknown 
COG ID[COG3647] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCA CACTCAAGCC GTTAATTCTT AACACCGGCG CACTGGCGCT AACGTTAATC 
CTGATTTATA CCGGCATTTC GGCCCATGAC AAACTCACCT GGCTGATGGA AGTGACACCG
GTGATTATTG TCGTGCCGCT ACTGCTTGCC ACCGCTAAAC GTTATCCGTT AACGCCGCTG
CTCTATACGC TCATTTTCTT TCACGCCATC ATCCTGATGG TCGGCGGGCA ATACACCTAC
GCGAAAGTCC CCGTTGGTTT TGAGGTGCAG GAATGGCTGG GGTTGAGCCG TAATCCGTAT
GACAAGCTGG GGCATTTTTT CCAGGGGCTG GTGCCTGCAC TGGTGGCGCG AGAAATTCTC
GTTCGCGGGA TGTACGTTCG CGGACGTAAG ATGGTGGCGT TTCTGGTCTG CTGCGTGGCG
CTGGCGATAA GCGCGATGTA TGAGTTAATC GAGTGGTGGG CAGCGCTGGC AATGGGCCAG
GGAGCGGATG ATTTTCTCGG CACCCAGGGC GACCAATGGG ACACGCAATC CGATATGTTC
TGCGCGCTGC TTGGCGCATT AACGACGGTG ACACTCCTCG CCGGAACACA CTGTCGCCAA
CTACGGCGCT ATGGTTTGAT AACCGGATAA
 
Protein sequence
MTRTLKPLIL NTGALALTLI LIYTGISAHD KLTWLMEVTP VIIVVPLLLA TAKRYPLTPL 
LYTLIFFHAI ILMVGGQYTY AKVPVGFEVQ EWLGLSRNPY DKLGHFFQGL VPALVAREIL
VRGMYVRGRK MVAFLVCCVA LAISAMYELI EWWAALAMGQ GADDFLGTQG DQWDTQSDMF
CALLGALTTV TLLAGTHCRQ LRRYGLITG