Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4485 |
Symbol | lysC |
ID | 6144933 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 4581431 |
End bp | 4582780 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641619301 |
Product | aspartate kinase III |
Protein accession | YP_001746413 |
Protein GI | 170684154 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0527] Aspartokinases |
TIGRFAM ID | [TIGR00656] aspartate kinase, monofunctional class [TIGR00657] aspartate kinase |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGAAA TTGTTGTCTC CAAATTTGGC GGTACCAGCG TAGCTGATTT TGACGCCATG AACCGCAGCG CTGATATTGT GCTTTCTGAT GCCAACGTAC GTTTAGTTGT CCTCTCGGCT TCTGCTGGTA TCACTAATCT GCTGGTCGCT TTAGCTGAAG GACTGGAACC TGGCGAGCGA TTCGAAAAAC TCGACGCAAT CCGCAATATC CAGTTTGCCA TTCTGGAACG TCTGCGTTAC CCGAACGTTA TCCGTGAAGA GATTGAACGT CTGCTGGAGA ATATTACTGT TCTGGCAGAA GCGGCGGCGC TGGCAACGTC TCCGGCCCTG ACAGATGAAC TGGTCAGCCA CGGCGAGCTG ATGTCGACCC TGCTGTTTGT CGAAATCCTG CGCGAACGCG ATGTTCAGGC ACAGTGGTTT GATGTACGTA AAGTGATGCG TACCAACGAC CGATTTGGTC GTGCAGAGCC AGATGTAGCC GCGCTGGCGG AACTGGCCGC GCTGCAGCTG CTCCCACGCC TCAATGAAGG CTTAGTGATC ACCCAGGGAT TTATCGGTAG CGAAAATAAA GGTCGGACAA CGACGCTTGG CCGTGGAGGC AGCGATTATA CGGCAGCCTT GCTGGCGGAG GCTTTACACG CATCTCGTGT TGATATCTGG ACCGACGTCC CGGGCATCTA CACCACCGAT CCACGCGTGG TTTCCGCAGC AAAACGCATT GATGAAATCG CGTTTGCCGA AGCGGCAGAG ATGGCAACTT TTGGTGCAAA AGTACTGCAT CCGGCAACGT TGCTACCCGC AGTACGCAGC GATATCCCGG TCTTTGTCGG CTCCAGCAAA GACCCACGCG CAGGTGGTAC GCTGGTGTGC AATAAAACTG AAAATCCGCC GCTGTTCCGC GCGCTGGCGC TTCGTCGCAA TCAGACTCTG CTCACTTTGC ACAGCCTGAA TATGCTGCAT TCTCGCGGTT TCCTCGCGGA AGTTTTCGGC ATCCTCGCGC GGCATAATAT TTCGGTAGAC TTAATCACCA CGTCAGAAGT GAGCGTGGCA TTAACCCTTG ATACCACCGG TTCAACCTCC ACTGGCGATA CGTTGCTGAC GCAATCCCTG CTGATGGAGC TTTCCGCACT GTGCCGGGTG GAAGTGGAAG AGGGGCTGGC GCTGGTCGCG TTGATTGGCA ATGACCTGTC AAAAGCCTGC GGCGTTGGCA AAGAGGTATT CGGCGTACTG GAACCGTTCA ACATTCGCAT GATTTGTTAC GGCGCATCCA GCCATAACCT GTGCTTCCTG GTGCCCGGCG AAGATGCCGA GCAGGTGGTG CAGAAGCTGC ATTTTAATTT ATTTGAGTAA
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Protein sequence | MSEIVVSKFG GTSVADFDAM NRSADIVLSD ANVRLVVLSA SAGITNLLVA LAEGLEPGER FEKLDAIRNI QFAILERLRY PNVIREEIER LLENITVLAE AAALATSPAL TDELVSHGEL MSTLLFVEIL RERDVQAQWF DVRKVMRTND RFGRAEPDVA ALAELAALQL LPRLNEGLVI TQGFIGSENK GRTTTLGRGG SDYTAALLAE ALHASRVDIW TDVPGIYTTD PRVVSAAKRI DEIAFAEAAE MATFGAKVLH PATLLPAVRS DIPVFVGSSK DPRAGGTLVC NKTENPPLFR ALALRRNQTL LTLHSLNMLH SRGFLAEVFG ILARHNISVD LITTSEVSVA LTLDTTGSTS TGDTLLTQSL LMELSALCRV EVEEGLALVA LIGNDLSKAC GVGKEVFGVL EPFNIRMICY GASSHNLCFL VPGEDAEQVV QKLHFNLFE
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