Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4358 |
Symbol | cdh |
ID | 6146014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 4447358 |
End bp | 4448113 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641619179 |
Product | CDP-diacylglycerol pyrophosphatase |
Protein accession | YP_001746303 |
Protein GI | 170679863 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2134] CDP-diacylglycerol pyrophosphatase |
TIGRFAM ID | [TIGR00672] CDP-diacylglycerol pyrophosphatase, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 0.619919 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAG CGGGTCTTCT TTTTTTGGTG ATGATAGTTA TCGCCGTTGT GGCTGCCGGT ATTGGTTACT GGAAATTAAC CGGTGAAGAG TCGGATACAT TACGTAAGAT TGTCCTTGAG GAATGTTTGC CCAATCAGCA GCAAAATCAA AATCCTTCGC CATGTGCGGA AGTCAAACCC AACGCCGGAT ACGTGGTTTT AAAAGATCTT AATGGCCCAC TGCAATATCT GTTGATGCCA ACGTATCGTA TTAACGGTAC TGAAAGTCCT TTGTTGACCG ATCCTTCAAC GCCGAACTTC TTTTGGTTGG CCTGGCAGGC GCGTGATTTT ATGAGCAAAA AATACGGCCA GCCGGTTCCC GATCGCGCGG TTTCTTTGGC GATCAACTCT CGCACCGGGC GTACGCAAAA CCATTTTCAT ATTCATATTT CTTGTATTCG TCCTGATGTG CGCGAACAGC TGGATAACAA TCTGGCGAAC ATCAGTAGCC GCTGGTTGCC ACTGCCAGGT GGTTTGCGTG GGCATGAGTA CCTGGCGCGT CGGGTAACGG AAAGCGAACT GGTACAACGC AGCCCATTTA TGATGCTTGC AGAAGAAGTG CCTGAGGCGC GGGAACATAT GGGAAGCTAC GGGCTGGCAA TGGTACGGCA GAGTGATAAC TCATTTGTAT TGCTGGCGAC ACAACGAAAT CTACTGACGC TGAACCGTGC TTCAGCCGAG GAAATCCAGG ATCATCAGTG TGAGATTTTG CGTTAA
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Protein sequence | MKKAGLLFLV MIVIAVVAAG IGYWKLTGEE SDTLRKIVLE ECLPNQQQNQ NPSPCAEVKP NAGYVVLKDL NGPLQYLLMP TYRINGTESP LLTDPSTPNF FWLAWQARDF MSKKYGQPVP DRAVSLAINS RTGRTQNHFH IHISCIRPDV REQLDNNLAN ISSRWLPLPG GLRGHEYLAR RVTESELVQR SPFMMLAEEV PEAREHMGSY GLAMVRQSDN SFVLLATQRN LLTLNRASAE EIQDHQCEIL R
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