Gene EcSMS35_4332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4332 
Symbol 
ID6144986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4426822 
End bp4427247 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content58% 
IMG OID641619153 
Productphage lysis timing protein LysB 
Protein accessionYP_001746277 
Protein GI170682622 
COG category 
COG ID 
TIGRFAM ID[TIGR03495] phage lysis regulatory protein, LysB family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.00690858 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCAAAGC TGATGATTGT GCTGGTCGTG TTGTTATCAC TGGCGGTGGC CGGTCTGTTT 
CTGGTGAAAC ACAAAAATGC CAGCCTGCGC GCCTCGCTGG ACAGGGCGAA CAACGTCGCC
AGTGAACAGC AGACGACCAT CACCATGCTG AAAAATCAGC TTCATGTTGC CCTTACCAGG
GCAGACAAAA ACGAGCTGGC GCAGGTGGCA CTGCGTCAGG AGCTGGAGAA CGCCGCGAAG
CGTGAAGCAC AGCGCGAGAA AACCATCACG AGGTTACTTA ATGAAAACGA AGATTTTCGC
CGCTGGTACG GCGCTGACCT GCCTGATGCT GTGCGCCGGT TGCACCAGCG CCCGGCCTGC
GCCGACGCCA GTGATTGTCC ACAACGCCTG CCCGAAAGTG AGCCTTTGCC CGATGCCGGG
CAGTGA
 
Protein sequence
MSKLMIVLVV LLSLAVAGLF LVKHKNASLR ASLDRANNVA SEQQTTITML KNQLHVALTR 
ADKNELAQVA LRQELENAAK REAQREKTIT RLLNENEDFR RWYGADLPDA VRRLHQRPAC
ADASDCPQRL PESEPLPDAG Q