Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4324 |
Symbol | |
ID | 6143273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 4422067 |
End bp | 4422921 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641619145 |
Product | phage capsid scaffolding protein GpO |
Protein accession | YP_001746269 |
Protein GI | 170679886 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.00944924 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAAAAA AAGTCTCAAA ATTCTTTCGT ATCGGCGTTG AGGGTGACAC CTGTGACGGG CGTGTCATCA GTGCGCAGGA TATTCAGGAA ATGGCGGAAA CCTTTGACCC GCGTGTCTAT GGTTGCCGTA TTAACCTGGA ACATCTGCGA GGCATCCTGC CTGACGGCAT TTTTAAACGT TATGGCGATG TGGTCGAACT GAAGGCCGAA AAGATTGACG ATGATTCGGC GCTGAAAGGC AAATGGGCGC TGTTTGCGAA AATCACCCCG ACCGATGACC TTATCGCGAT GAACAAGGCC GCACAGAAGG TCTACACCTC AATGGAAATT CAGCCGAACT TTGCCAACAC CGGCAAATGT TATCTGGTGG GTCTGGCCGT CACCGATGAC CCGGCAAGCC TCGGCACGGA ATATCTGGAA TTCTGCCGCA CGGCAAAACA CAACCCCCTG AACCGCTTCA AATTAAGCCC TGAAAACCTG ATTTCAGTGG CAACGCCCGT TGAGCTGGAA TTTGAAGACC TGCCTGAAAC CGTGTTCACC GCCCTGACCG AAAAGGTGAA ATCCATTTTT GGCCGCAAAC AGGCCAGCGA TGACGCCCGT CTGAATGACG TGCATGAAGC GGTGACCGCT GTCGCTGAGC ATGTGCAGGA AAAACTGAGC GCCACTGAGC AGCGCCTTGC TGAGATGGAA ACCGCCTTTT CCGCACTTAA GCAGGATGTG ACTGACAGGG CGGATGAAAC CAGTCAGGCA TTCACCCGCC TGAAAAACAG TCTCGACCAC ACCGAAAGTC TGACCCAGCA GCGCCGCAGC AAAGCCACCG GCGGTGGCGG TGACGCCCTG ATGACGAACT GCTGA
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Protein sequence | MAKKVSKFFR IGVEGDTCDG RVISAQDIQE MAETFDPRVY GCRINLEHLR GILPDGIFKR YGDVVELKAE KIDDDSALKG KWALFAKITP TDDLIAMNKA AQKVYTSMEI QPNFANTGKC YLVGLAVTDD PASLGTEYLE FCRTAKHNPL NRFKLSPENL ISVATPVELE FEDLPETVFT ALTEKVKSIF GRKQASDDAR LNDVHEAVTA VAEHVQEKLS ATEQRLAEME TAFSALKQDV TDRADETSQA FTRLKNSLDH TESLTQQRRS KATGGGGDAL MTNC
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