Gene EcSMS35_4324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4324 
Symbol 
ID6143273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4422067 
End bp4422921 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content54% 
IMG OID641619145 
Productphage capsid scaffolding protein GpO 
Protein accessionYP_001746269 
Protein GI170679886 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.00944924 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAAAAA AAGTCTCAAA ATTCTTTCGT ATCGGCGTTG AGGGTGACAC CTGTGACGGG 
CGTGTCATCA GTGCGCAGGA TATTCAGGAA ATGGCGGAAA CCTTTGACCC GCGTGTCTAT
GGTTGCCGTA TTAACCTGGA ACATCTGCGA GGCATCCTGC CTGACGGCAT TTTTAAACGT
TATGGCGATG TGGTCGAACT GAAGGCCGAA AAGATTGACG ATGATTCGGC GCTGAAAGGC
AAATGGGCGC TGTTTGCGAA AATCACCCCG ACCGATGACC TTATCGCGAT GAACAAGGCC
GCACAGAAGG TCTACACCTC AATGGAAATT CAGCCGAACT TTGCCAACAC CGGCAAATGT
TATCTGGTGG GTCTGGCCGT CACCGATGAC CCGGCAAGCC TCGGCACGGA ATATCTGGAA
TTCTGCCGCA CGGCAAAACA CAACCCCCTG AACCGCTTCA AATTAAGCCC TGAAAACCTG
ATTTCAGTGG CAACGCCCGT TGAGCTGGAA TTTGAAGACC TGCCTGAAAC CGTGTTCACC
GCCCTGACCG AAAAGGTGAA ATCCATTTTT GGCCGCAAAC AGGCCAGCGA TGACGCCCGT
CTGAATGACG TGCATGAAGC GGTGACCGCT GTCGCTGAGC ATGTGCAGGA AAAACTGAGC
GCCACTGAGC AGCGCCTTGC TGAGATGGAA ACCGCCTTTT CCGCACTTAA GCAGGATGTG
ACTGACAGGG CGGATGAAAC CAGTCAGGCA TTCACCCGCC TGAAAAACAG TCTCGACCAC
ACCGAAAGTC TGACCCAGCA GCGCCGCAGC AAAGCCACCG GCGGTGGCGG TGACGCCCTG
ATGACGAACT GCTGA
 
Protein sequence
MAKKVSKFFR IGVEGDTCDG RVISAQDIQE MAETFDPRVY GCRINLEHLR GILPDGIFKR 
YGDVVELKAE KIDDDSALKG KWALFAKITP TDDLIAMNKA AQKVYTSMEI QPNFANTGKC
YLVGLAVTDD PASLGTEYLE FCRTAKHNPL NRFKLSPENL ISVATPVELE FEDLPETVFT
ALTEKVKSIF GRKQASDDAR LNDVHEAVTA VAEHVQEKLS ATEQRLAEME TAFSALKQDV
TDRADETSQA FTRLKNSLDH TESLTQQRRS KATGGGGDAL MTNC