| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4279 |
|---|
| Symbol | fdoH |
|---|
| ID | 6143568 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 4378538 |
|---|
| End bp | 4379440 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641619100 |
|---|
| Product | formate dehydrogenase-O, iron-sulfur subunit |
|---|
| Protein accession | YP_001746224 |
|---|
| Protein GI | 170680015 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
|---|
| TIGRFAM ID | [TIGR01582] formate dehydrogenase, beta subunit, Fe-S containing |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTATC AATCGCAAGA TATCATTCGT CGTTCCGCGA CTAACGGTCT GACCCCCGCG
CCTCAGGCGC GGGACTTCCA GGAAGAAGTG GCGAAACTCA TCGACGTCAC CACCTGTATC
GGCTGTAAAG CCTGTCAGGT GGCGTGTTCA GAGTGGAACG ACATTCGCGA TACCGTCGGC
AATAACATTG GGGTGTACGA CAACCCCAAT GATTTAAGTG CCAAATCGTG GACGGTGATG
CGATTCTCGG AAGTGGAGCA GAACGACAAA CTGGAATGGC TGATCCGCAA AGACGGCTGT
ATGCACTGTT CCGATCCAGG CTGCCTGAAA GCGTGCCCGG CGGAAGGGGC AATTATTCAG
TATGCCAACG GTATCGTCGA CTTCCAGTCC GAGCAGTGCA TCGGCTGCGG TTATTGCATT
GCGGGCTGTC CGTTCGACAT TCCGCGCCTC AACCCGGAAG ATAACCGCGT CTACAAATGT
ACGTTGTGCG TTGACCGCGT GGTGGTTGGG CAAGAACCGG CCTGCGTGAA GACCTGCCCA
ACGGGCGCGA TTCACTTCGG TACGAAAGAG TCGATGAAAA CGCTGGCGAG CGAGCGCGTG
GCGGAGCTGA AAACCCGTGG TTACGACAAT GCGGGTCTGT ACGATCCGGC AGGCGTCGGT
GGTACACACG TTATGTACGT GCTGCACCAT GCTGACAAGC CAAATCTGTA TCATGGCTTG
CCGGAGAACC CGGAAATCAG CGAAACCGTG AAATTCTGGA AAGGCATCTG GAAACCGCTC
GCAGCTGTTG GCTTTGCGGC TACCTTCGCA GCCAGTATCT TCCACTACGT GGGTGTCGGT
CCGAACCGTG CGGATGAGGA AGAGAATAAT CTGCACGAAG AGAAAGACGA GGAGCGCAAA
TGA
|
|---|
| Protein sequence | MAYQSQDIIR RSATNGLTPA PQARDFQEEV AKLIDVTTCI GCKACQVACS EWNDIRDTVG
NNIGVYDNPN DLSAKSWTVM RFSEVEQNDK LEWLIRKDGC MHCSDPGCLK ACPAEGAIIQ
YANGIVDFQS EQCIGCGYCI AGCPFDIPRL NPEDNRVYKC TLCVDRVVVG QEPACVKTCP
TGAIHFGTKE SMKTLASERV AELKTRGYDN AGLYDPAGVG GTHVMYVLHH ADKPNLYHGL
PENPEISETV KFWKGIWKPL AAVGFAATFA ASIFHYVGVG PNRADEEENN LHEEKDEERK
|
|---|
| |