| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4218 |
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| Symbol | ubiB |
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| ID | 6143929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 4315462 |
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| End bp | 4317102 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641619041 |
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| Product | putative ubiquinone biosynthesis protein UbiB |
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| Protein accession | YP_001746169 |
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| Protein GI | 170681731 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0661] Predicted unusual protein kinase |
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| TIGRFAM ID | [TIGR01982] 2-polyprenylphenol 6-hydroxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.00118244 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACGCCAG GTGAAGTACG GCGCCTATAT TTCATCATTC GCACTTTTTT AAGCTACGGA
CTTGATGAAC TGATCCCCAA AATGCGTATC ACCCTGCCGC TACGGCTATG GCGATACTCA
TTATTCTGGA TGCCAAATCG GCATAAAGAC AAACCTTTAG GTGAGCGACT ACGACTGGCC
CTGCAAGAAC TGGGACCGGT ATGGATCAAG TTCGGGCAGA TGTTATCAAC CCGCCGCGAT
CTTTTTCCGC CGCATATTGC CGATCAGCTG GCGTTATTGC AGGACAAAGT CGCTCCGTTT
GATGGCAAGC TGGCGAAGCA GCAGATTGAA GCTGCAATGG GCGGCTTGCC GGTAGAAGCG
TGGTTTGACG ATTTTGAAAT CAAGCCGCTG GCTTCTGCTT CTATCGCCCA GGTTCATACC
GCGCGATTGA AATCGAATGG TAAAGAGGTG GTGATTAAAG TCATCCGCCC GGATATTTTG
CCGGTTATTA AAGCGGATCT GAAACTTATC TACCGGCTGG CTCGCTGGGT GCCGCGTTTG
CTGCCGGATG GTCGCCGTCT GCGCCCAACC GAAGTGGTGC GCGAGTACGA AAAGACCTTG
ATTGATGAAC TGAATTTGCT GCGGGAATCT GCCAACGCCA TTCAGCTTCG ACGCAATTTT
GAAGACAGCC CGATGCTCTA CATCCCGGAA GTTTACCCTG ACTATTGTAG TGAAGGGATG
ATGGTAATGG AGCGTATTTA CGGCATTCCG GTGTCTGATG TTGCGACGCT GGAGAAAAAC
GGCACAAACA TGAAATTGCT GGCGGAACGC GGCGTGCAGG TGTTCTTCAC TCAGGTCTTT
CGCGACAGCT TTTTCCATGC CGATATGCAC CCTGGCAACA TCTTCGTAAG CTATGAACAC
CCGGAAAACC CGAAATATAT CGGCATTGAT TGCGGGATTG TTGGCTCGCT AAACAAAGAA
GATAAACGCT ATCTGGCAGA AAACTTTATC GCCTTCTTTA ATCGCGACTA TCGCAAAGTG
GCAGAGCTAC ACGTCGATTC TGGCTGGGTG CCACCAGATA CCAACGTTGA AGAGTTCGAA
TTTGCCATTC GTACGGTCTG TGAACCTATC TTTGAGAAAC CGCTGGCCGA AATTTCGTTT
GGACATGTAC TGTTAAATCT GTTTAATACG GCGCGTCGCT TCAATATGGA AGTGCAGCCG
CAACTGGTGT TACTCCAGAA AACCCTGCTC TACGTCGAAG GGGTAGGACG CCAGCTTTAT
CCGCAACTCG ATTTATGGAA AACGGCGAAG CCTTTCCTGG AGTCGTGGAT TAAAGATCAG
GTCGGTATTC CTGCGCTGGT GAGAGCATTT AAAGAAAAAG CGCCGTTCTG GGTCGAAAAA
ATGCCAGAAC TGCCTGAACT GGTTTACGAC AGTTTGCGCC AGGGCAAGTA TTTACAGCAC
AGTGTTGATA AGATTGCCCG CGAGCTTCAG TCAAATCATG TACGTCAGGG ACAATCGCGT
TATTTTCTCG GAATTGGCGC TACGTTAGTA TTAAGTGGCA CATTCTTGTT GGTCAGCCGA
CCTGAATGGG GGCTGATGCC CGTCTGGTTA ATGGCAGGTG GTCTGATCGC CTGGTTTGTC
GGTTGGCGCA AAACACGCTG A
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| Protein sequence | MTPGEVRRLY FIIRTFLSYG LDELIPKMRI TLPLRLWRYS LFWMPNRHKD KPLGERLRLA
LQELGPVWIK FGQMLSTRRD LFPPHIADQL ALLQDKVAPF DGKLAKQQIE AAMGGLPVEA
WFDDFEIKPL ASASIAQVHT ARLKSNGKEV VIKVIRPDIL PVIKADLKLI YRLARWVPRL
LPDGRRLRPT EVVREYEKTL IDELNLLRES ANAIQLRRNF EDSPMLYIPE VYPDYCSEGM
MVMERIYGIP VSDVATLEKN GTNMKLLAER GVQVFFTQVF RDSFFHADMH PGNIFVSYEH
PENPKYIGID CGIVGSLNKE DKRYLAENFI AFFNRDYRKV AELHVDSGWV PPDTNVEEFE
FAIRTVCEPI FEKPLAEISF GHVLLNLFNT ARRFNMEVQP QLVLLQKTLL YVEGVGRQLY
PQLDLWKTAK PFLESWIKDQ VGIPALVRAF KEKAPFWVEK MPELPELVYD SLRQGKYLQH
SVDKIARELQ SNHVRQGQSR YFLGIGATLV LSGTFLLVSR PEWGLMPVWL MAGGLIAWFV
GWRKTR
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