Gene EcSMS35_4202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4202 
Symbol 
ID6146550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4303253 
End bp4304113 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content50% 
IMG OID641619025 
Producthypothetical protein 
Protein accessionYP_001746153 
Protein GI170684276 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.000910072 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTACAGG TTACGCTTTG CGCATCGTCG TTGGGATATC TTTTCCCGCA GAATGAAACG 
CAAGATTTAC GTCTACATAG CGCTTTTAAA CATGCGGTAA ATCTGTATTC AGACGCGGGA
ACATTCATCA CTCTGTTGTG TGCGCAAACG TATCTGAATC TCCCTGATGC AGCCAGAGTC
TGGCTACCTG AATGTTGGGA CTGGCGAAGA GAGATTGCCC ATTCAGATCC CATTCAGTTA
ACCCCAGGCT TACTGCGGAC ACCTCGATTT TGTGTGGCGC TCGAAAACGC AACGCTCTGG
CAGTCGCCAT TTGTGGGGGG AATGCTGACA CTTGAGGCAT TCCCTTTGGT TTTCCAGCAC
TACCCAACGA TGGCATCGCA ACGGCTTTTA TTTTGTCTGG AACATAACGT TCAAAGCACA
TTGCACCTGC CGGATAGTCT CACGCACCAG GGATTAGCGA TTATGGAGCA TCCAGATGCG
CTGGAACGCC AGGTGCCACA ACTGATCGGC TTTGGTAAAG GCTTAACGCC CGATGGAGAT
GACTATTTGT TGGGCTATCT GGCAGCACTC TGGTTATGGC AACTCCCTGC ACCACTTGCC
GATCATCAAT ACCGGTTGCA GCAGGTAATT GATCAACATG CGCACAACAC CACGGATATC
AGTCGTCATT ATCTGGAGCG TGCGCTTCAG GGACATTTTT CAGAACCGAT TTGCCAGTTA
CTCGCACAAC TGGTTGGGAG TGCATCGGCA ATGACAATCG CATCCTGTGC AGAACAGGTC
ATGCAATTTG GCGCAACGTC AGGAGTAGAT TGCCTTGCAG GAATGCTGCA TGGCTTTCGA
ACCCTGAACA CCATAAATTG A
 
Protein sequence
MVQVTLCASS LGYLFPQNET QDLRLHSAFK HAVNLYSDAG TFITLLCAQT YLNLPDAARV 
WLPECWDWRR EIAHSDPIQL TPGLLRTPRF CVALENATLW QSPFVGGMLT LEAFPLVFQH
YPTMASQRLL FCLEHNVQST LHLPDSLTHQ GLAIMEHPDA LERQVPQLIG FGKGLTPDGD
DYLLGYLAAL WLWQLPAPLA DHQYRLQQVI DQHAHNTTDI SRHYLERALQ GHFSEPICQL
LAQLVGSASA MTIASCAEQV MQFGATSGVD CLAGMLHGFR TLNTIN