6 homologs were found in PanDaTox collection
for query gene EcSMS35_4173 on replicon NC_010498
Organism: Escherichia coli SMS-3-5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010498  EcSMS35_4173  putative lipoprotein  100 
 
 
87 aa  185  2e-46  Escherichia coli SMS-3-5  Bacteria  normal  normal  0.0249702 
 
 
-
 
NC_009800  EcHS_A4030  putative lipoprotein  96.15 
 
 
489 aa  85.9  2e-16  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_4324  putative lipoprotein  92.31 
 
 
492 aa  83.2  0.000000000000001  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A4155  hypothetical protein  65.38 
 
 
670 aa  62.8  0.000000002  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_009801  EcE24377A_4323  hypothetical protein  87.5 
 
 
437 aa  47.8  0.00005  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A4029  hypothetical protein  87.5 
 
 
441 aa  47.8  0.00006  Escherichia coli HS  Bacteria  normal  n/a   
 
 
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