| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4115 |
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| Symbol | trkD |
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| ID | 6143844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 4211115 |
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| End bp | 4212983 |
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| Gene Length | 1869 bp |
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| Protein Length | 622 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641618939 |
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| Product | potassium transport protein Kup |
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| Protein accession | YP_001746077 |
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| Protein GI | 170682987 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3158] K+ transporter |
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| TIGRFAM ID | [TIGR00794] potassium uptake protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.133962 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACTG ATAATAAGCA ATCATTGCCC GCGATTACCC TCGCGGCGAT TGGAGTTGTC
TACGGCGATA TTGGTACCAG CCCGTTATAT ACACTTCGTG AATGTTTGTC CGGCCAGTTT
GGTTTTGGCG TTGAACGCGA TGCCGTGTTT GGCTTTTTAT CGCTGATCTT CTGGCTGCTA
ATCTTTGTGG TTTCCATTAA ATATCTCACC TTCGTGATGC GGGCAGATAA CGCCGGTGAA
GGGGGGATCC TGACGTTGAT GTCGCTTGCC GGGCGTAATA CGTCGGCGCG AACCACATCA
ATGCTGGTGA TTATGGGGCT AATCGGCGGC AGCTTTTTCT ATGGTGAAGT CGTCATAACA
CCCGCTATTT CGGTGATGTC AGCCATTGAA GGTCTGGAAA TCGTCGCCCC GCAGCTGGAT
ACCTGGATAG TTCCCCTCTC AATTATCGTT CTCACTTTAT TATTTATGAT TCAAAAACAT
GGCACGGCTA TGGTCGGTAA GCTGTTTGCA CCGATCATGC TGACCTGGTT TTTGATTCTG
GCAGGGCTGG GGTTACGTAG CATTATTGCT AACCCGGAAG TGCTGCATGC ACTGAATCCG
ATGTGGGCGG TGCATTTCTT CCTTGAATAC AAAACGGTTT CTTTTATTGC ATTAGGGGCA
GTGGTGCTGT CGATTACGGG GGTCGAGGCG CTGTATGCTG ATATGGGGCA CTTTGGTAAG
TTCCCTATTC GTCTGGCGTG GTTCACCGTC GTATTGCCTT CCTTAACCCT TAATTACTTC
GGCCAGGGAG CGCTGTTGTT AAAGAATCCG GAAGCGATTA AGAACCCGTT CTTCCTGTTG
GCACCGGACT GGGCGCTGAT CCCGCTGCTG ATCATCGCCG CACTGGCGAC GGTAATTGCC
TCGCAGGCGG TTATCTCTGG CGTCTTCTCA TTGACGCGTC AGGCGGTACG TCTGGGATAT
TTGTCGCCGA TGCGCATTAT TCACACCTCC GAAATGGAGT CAGGGCAAAT CTATATTCCC
TTTGTGAACT GGATGCTCTA TGTCGCGGTC GTGATTGTGA TTGTCAGCTT TGAGCACTCC
AGCAACCTGG CGGCGGCGTA CGGGATTGCG GTGACCGGAA CCATGGTGCT GACGTCTATT
CTCTCGACTA CCGTGGCACG TCAGAACTGG CACTGGAATA AGTATTTTGT TGCGCTGATC
CTGATTGCTT TCCTTTGTGT CGATATTCCC TTGTTCACCG CTAACCTCGA TAAACTGCTC
TCCGGCGGCT GGTTGCCATT AAGCCTCGGT ACGGTGATGT TTATCGTGAT GACCACCTGG
AAGAGCGAGC GTTTCCGCTT GCTGCGGCGG ATGCATGAAC ATGGTAACTC TCTGGAAGCA
ATGATTGCTT CGCTGGAGAA ATCACCGCCC GTTCGCGTGC CTGGGACCGC GGTGTATATG
TCGCGTGCAA TCAACGTCAT TCCCTTTGCG CTGATGCATA ACCTGAAACA TAACAAGGTA
TTGCATGAGC GGGTGATTCT GTTAACTCTG CGCACCGAAG ACGCGCCATA TGTCCATAAC
GTCCGTCGGG TACAGATTGA ACAACTGTCG CCCACTTTCT GGCGCGTGGT GGCAAGTTAT
GGTTGGCGAG AAACGCCAAA CGTGGAAGAA GTTTTCCACC GCTGCGGTCT GGAAGGATTA
AGTTGCCGGA TGATGGAAAC CTCCTTCTTT ATGTCGCATG AGTCGTTGAT CCTCGGCAAA
CGCCCGTGGT ATTTGCGTCT GCGCGGCAAG CTGTACTTGC TGCTGCAACG TAATGCGCTG
CGTGCGCCGG ATCAATTTGA AATCCCGCCA AACAGGGTTA TCGAACTGGG TACTCAGGTC
GAAATCTAA
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| Protein sequence | MSTDNKQSLP AITLAAIGVV YGDIGTSPLY TLRECLSGQF GFGVERDAVF GFLSLIFWLL
IFVVSIKYLT FVMRADNAGE GGILTLMSLA GRNTSARTTS MLVIMGLIGG SFFYGEVVIT
PAISVMSAIE GLEIVAPQLD TWIVPLSIIV LTLLFMIQKH GTAMVGKLFA PIMLTWFLIL
AGLGLRSIIA NPEVLHALNP MWAVHFFLEY KTVSFIALGA VVLSITGVEA LYADMGHFGK
FPIRLAWFTV VLPSLTLNYF GQGALLLKNP EAIKNPFFLL APDWALIPLL IIAALATVIA
SQAVISGVFS LTRQAVRLGY LSPMRIIHTS EMESGQIYIP FVNWMLYVAV VIVIVSFEHS
SNLAAAYGIA VTGTMVLTSI LSTTVARQNW HWNKYFVALI LIAFLCVDIP LFTANLDKLL
SGGWLPLSLG TVMFIVMTTW KSERFRLLRR MHEHGNSLEA MIASLEKSPP VRVPGTAVYM
SRAINVIPFA LMHNLKHNKV LHERVILLTL RTEDAPYVHN VRRVQIEQLS PTFWRVVASY
GWRETPNVEE VFHRCGLEGL SCRMMETSFF MSHESLILGK RPWYLRLRGK LYLLLQRNAL
RAPDQFEIPP NRVIELGTQV EI
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