Gene EcSMS35_4057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4057 
Symbol 
ID6146973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4148615 
End bp4149763 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content53% 
IMG OID641618882 
Productgalactonate dehydratase 
Protein accessionYP_001746020 
Protein GI170682934 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCA CCAAAATTAC CACGTATCGT TTACCTCCCC GCTGGATGTT CCTGAAAATT 
GAAACCGATG AAGGCGTGGT CGGCTGGGGC GAGCCCGTGA TTGAAGGCCG CGCCCGTACG
GTGGAAGCGG CAGTTCACGA GCTGGGTGAC TATTTGATTG GTCAGGATCC ATCGCGCATC
AATGACTTAT GGCAAGTGAT GTATCGCGCC GGATTTTATC GTGGCGGTCC AATCCTGATG
AGCGCCATCG CCGGTATCGA CCAGGCGTTA TGGGATATCA AAGGCAAAGT GCTGAATGCG
CCGGTCTGGC AACTGATGGG CGGCCTGGTT CGCGACAAAA TTAAAGCCTA CAGTTGGGTC
GGCGGCGATC GTCCGGCGGA TGTTATCGAC GGCATTAAAA CGCTACGCGA AATCGGCTTC
GATACCTTCA AACTGAACGG TTGTGAAGAA CTGGGGCTAA TTGATAACTC CCGCGCGGTA
GATGCGGCAG TCAACACCGT GGCACAAATT CGTGAAGCCT TTGGCAATCA GATTGAGTTT
GGTCTTGATT TCCATGGTCG CGTCAGCGCG CCGATGGCGA AAGTGCTGAT TAAAGAGCTG
GAACCGTATC GTCCGCTGTT TATTGAAGAG CCGGTGCTGG CGGAACAGGC CGAATACTAC
CCGAAACTGG CGGCACAAAC GCATATTCCA CTGGCGGCGG GTGAGCGCAT GTTCTCACGC
TTCGATTTTA AACGTGTGCT GGAGGCAGGC GGTATTTCGA TTCTGCAACC GGATCTCTCC
CACGCAGGCG GTATTACCGA ATGCTACAAA ATTGCCGGAA TGGCAGAAGC CTATGACGTG
ACCCTTGCGC CGCACTGTCC GCTCGGACCG ATTGCACTGG CGGCTTGCCT GCATATCGAC
TTTGTTTCCT ATAACGCCGT CCTTCAGGAA CAAAGTATGG GCATTCATTA CAACAAAGGC
GCGGAGTTAC TCGACTTTGT GAAAAACAAA GAGGACTTCA GCATGGTCGG CGGTTTCTTT
AAACCATTAA CGAAACCGGG CTTAGGCGTG GAAATCGACG AAGCTAAAGT TATTGAGTTC
AGTAAAAATG CCCCGGACTG GCGTAATCCG CTCTGGCGTC ATGAAGATAA CAGCGTAGCA
GAGTGGTAA
 
Protein sequence
MKITKITTYR LPPRWMFLKI ETDEGVVGWG EPVIEGRART VEAAVHELGD YLIGQDPSRI 
NDLWQVMYRA GFYRGGPILM SAIAGIDQAL WDIKGKVLNA PVWQLMGGLV RDKIKAYSWV
GGDRPADVID GIKTLREIGF DTFKLNGCEE LGLIDNSRAV DAAVNTVAQI REAFGNQIEF
GLDFHGRVSA PMAKVLIKEL EPYRPLFIEE PVLAEQAEYY PKLAAQTHIP LAAGERMFSR
FDFKRVLEAG GISILQPDLS HAGGITECYK IAGMAEAYDV TLAPHCPLGP IALAACLHID
FVSYNAVLQE QSMGIHYNKG AELLDFVKNK EDFSMVGGFF KPLTKPGLGV EIDEAKVIEF
SKNAPDWRNP LWRHEDNSVA EW