10 homologs were found in PanDaTox collection
for query gene EcSMS35_4005 on replicon NC_010498
Organism: Escherichia coli SMS-3-5



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010498  EcSMS35_4005  glycoprotein 3, capsid size determination protein Sid  100 
 
 		 244 aa  499  1e-140  Escherichia coli SMS-3-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010468  EcolC_0049  hypothetical protein  98.36 
 
 		 244 aa  494  1e-139  Escherichia coli ATCC 8739  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010468  EcolC_1059  hypothetical protein  97.95 
 
 		 244 aa  489  1e-137  Escherichia coli ATCC 8739  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011080  SNSL254_A2958  glycoprotein 3  63.2 
 
 		 231 aa  299  3e-80  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.465967  hitchhiker  0.000000636079 
 
 
-
 
NC_009436  Ent638_3105  hypothetical protein  57.5 
 
 		 243 aa  273  1.0000000000000001e-72  Enterobacter sp. 638  Bacteria  normal  1  normal  0.22249 
 
 
-
 
NC_012917  PC1_3276  hypothetical protein  34.73 
 
 		 253 aa  127  2.0000000000000002e-28  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_012917  PC1_0717  hypothetical protein  34.73 
 
 		 253 aa  125  5e-28  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011094  SeSA_A0383  putative capsid morphogenesis protein encoded in CP-933I  23.89 
 
 		 253 aa  55.8  0.0000006  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  1  normal  0.163286 
 
 
-
 
NC_011149  SeAg_B4785  putative capsid morphogenesis protein encoded in CP-933I  23.79 
 
 		 253 aa  55.5  0.0000008  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  1  n/a   
 
 
-
 
NC_011353  ECH74115_0315  putative head size determination protein  22.63 
 
 		 250 aa  53.1  0.000004  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  1  normal  0.29302 
 
 
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