9 homologs were found in PanDaTox collection
for query gene EcSMS35_4004 on replicon NC_010498
Organism: Escherichia coli SMS-3-5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010498  EcSMS35_4004  phage polarity suppression protein  100 
 
 
190 aa  390  1e-108  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_010468  EcolC_0051  polarity suppression protein  98.4 
 
 
187 aa  378  1e-104  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_010468  EcolC_1061  polarity suppression protein  95.26 
 
 
190 aa  361  4e-99  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_3103  phage polarity suppression  64.89 
 
 
188 aa  228  4e-59  Enterobacter sp. 638  Bacteria  normal  normal  0.21078 
 
 
-
 
NC_011080  SNSL254_A2955  phage polarity suppression protein  64.02 
 
 
188 aa  216  1e-55  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  hitchhiker  0.0000000929563 
 
 
-
 
NC_011353  ECH74115_0314  putative polarity suppression protein  30.05 
 
 
183 aa  62  0.000000005  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal  0.210538 
 
 
-
 
NC_011080  SNSL254_A4840  putative polarity suppression protein  29.27 
 
 
184 aa  60.5  0.00000002  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.0894575  normal  0.402781 
 
 
-
 
NC_011094  SeSA_A0383  putative capsid morphogenesis protein encoded in CP-933I  26.36 
 
 
253 aa  42  0.005  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.163286 
 
 
-
 
NC_011149  SeAg_B4785  putative capsid morphogenesis protein encoded in CP-933I  26.36 
 
 
253 aa  41.6  0.007  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
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