Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3897 |
Symbol | |
ID | 6143188 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 3967755 |
End bp | 3968603 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641618723 |
Product | IclR family transcriptional regulator |
Protein accession | YP_001745862 |
Protein GI | 170680133 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGGAAAG AAGTGATGGG AAAAAAAGAG AACGAGATGG CGCAGGAAAA AGAGCGTCCA GCCGGAAGCC AGAGTCTGTT TCGTGGGTTG ATGCTGATTG AGATTTTGAG CAACTATCCA AACGGTTGTC CGTTGGCGCA TCTTTCGGAA CTGGCTGGTT TAAATAAGAG TACCGTCCAT CGCTTATTGC AGGGATTACA GTCCTGCGGC TATGTGACCA CCGCGCCCGC CGCAGGGAGT TACCGCCTGA CCACCAAATT TATTGCCGTC GGGCAGAAGG CGCTGTCTTC GCTGAATATC ATTCATATCG CCGCTCCGCA TCTTGAGGCA TTGAACATCG CCACTGGTGA AACCATTAAC TTCTCCAGCC GCGAAGACGA TCACGCTATT TTGATTTATA AGCTGGAACC CACAACCGGG ATGCTGCGAA CCCGTGCCTA TATAGGCCAG CATATGCCGC TCTACTGTTC CGCAATGGGC AAGATCTACA TGGCGTTTGG TCACCCGGAC TACGTGAAGT CATACTGGGA AAGCCATCAG CATGAGATCC AGCCGTTAAC CCGCAATACC ATTACCGAGC TGCCCGCGAT GTTCGACGAA CTGGCGCACA TTCGTGAAAG CGGAGCGGCG ATGGACAGAG AAGAAAACGA ACTCGGCGTC TCCTGTATTG CTGTTCCGGT GTTTGATATT CATGGGCGGG TGCCGTACGC CGTGTCGATT TCGCTTTCGA CATCACGTCT GAAACAGGTG GGGGAGAAAA ATCTCCTGAA ACCACTGCGT GAAACCGCGC AGGCTATTTC TAATGAACTG GGATTTACTG TCAGGGACGA CCAGGGCGCG ATCACATAA
|
Protein sequence | MGKEVMGKKE NEMAQEKERP AGSQSLFRGL MLIEILSNYP NGCPLAHLSE LAGLNKSTVH RLLQGLQSCG YVTTAPAAGS YRLTTKFIAV GQKALSSLNI IHIAAPHLEA LNIATGETIN FSSREDDHAI LIYKLEPTTG MLRTRAYIGQ HMPLYCSAMG KIYMAFGHPD YVKSYWESHQ HEIQPLTRNT ITELPAMFDE LAHIRESGAA MDREENELGV SCIAVPVFDI HGRVPYAVSI SLSTSRLKQV GEKNLLKPLR ETAQAISNEL GFTVRDDQGA IT
|
| |