Gene EcSMS35_3897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3897 
Symbol 
ID6143188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3967755 
End bp3968603 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content52% 
IMG OID641618723 
ProductIclR family transcriptional regulator 
Protein accessionYP_001745862 
Protein GI170680133 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGAAAG AAGTGATGGG AAAAAAAGAG AACGAGATGG CGCAGGAAAA AGAGCGTCCA 
GCCGGAAGCC AGAGTCTGTT TCGTGGGTTG ATGCTGATTG AGATTTTGAG CAACTATCCA
AACGGTTGTC CGTTGGCGCA TCTTTCGGAA CTGGCTGGTT TAAATAAGAG TACCGTCCAT
CGCTTATTGC AGGGATTACA GTCCTGCGGC TATGTGACCA CCGCGCCCGC CGCAGGGAGT
TACCGCCTGA CCACCAAATT TATTGCCGTC GGGCAGAAGG CGCTGTCTTC GCTGAATATC
ATTCATATCG CCGCTCCGCA TCTTGAGGCA TTGAACATCG CCACTGGTGA AACCATTAAC
TTCTCCAGCC GCGAAGACGA TCACGCTATT TTGATTTATA AGCTGGAACC CACAACCGGG
ATGCTGCGAA CCCGTGCCTA TATAGGCCAG CATATGCCGC TCTACTGTTC CGCAATGGGC
AAGATCTACA TGGCGTTTGG TCACCCGGAC TACGTGAAGT CATACTGGGA AAGCCATCAG
CATGAGATCC AGCCGTTAAC CCGCAATACC ATTACCGAGC TGCCCGCGAT GTTCGACGAA
CTGGCGCACA TTCGTGAAAG CGGAGCGGCG ATGGACAGAG AAGAAAACGA ACTCGGCGTC
TCCTGTATTG CTGTTCCGGT GTTTGATATT CATGGGCGGG TGCCGTACGC CGTGTCGATT
TCGCTTTCGA CATCACGTCT GAAACAGGTG GGGGAGAAAA ATCTCCTGAA ACCACTGCGT
GAAACCGCGC AGGCTATTTC TAATGAACTG GGATTTACTG TCAGGGACGA CCAGGGCGCG
ATCACATAA
 
Protein sequence
MGKEVMGKKE NEMAQEKERP AGSQSLFRGL MLIEILSNYP NGCPLAHLSE LAGLNKSTVH 
RLLQGLQSCG YVTTAPAAGS YRLTTKFIAV GQKALSSLNI IHIAAPHLEA LNIATGETIN
FSSREDDHAI LIYKLEPTTG MLRTRAYIGQ HMPLYCSAMG KIYMAFGHPD YVKSYWESHQ
HEIQPLTRNT ITELPAMFDE LAHIRESGAA MDREENELGV SCIAVPVFDI HGRVPYAVSI
SLSTSRLKQV GEKNLLKPLR ETAQAISNEL GFTVRDDQGA IT