| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3892 |
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| Symbol | xylR |
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| ID | 6142912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 3961137 |
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| End bp | 3962315 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641618718 |
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| Product | xylose operon regulatory protein |
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| Protein accession | YP_001745857 |
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| Protein GI | 170682140 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators
[COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTACTA AACGTCACCG CATCACATTA CTGTTCAATG CCAATAAAGC CTATGACCGG
CAGGTAGTAG AAGGCGTAGG GGAATATTTA CAGGCGTCAC AATCGGAATG GGATATTTTC
ATTGAAGAAG ATTTCCGCGC CCGCATTGAT AAAATCAAGG ACTGGTTAGG AGATGGCGTC
ATTGCCGACT TCGACGACAA ACAAATCGAG CAAGCGCTGG CTGATGTCGA CGTCCCCATT
GTTGGGGTTG GTGGTTCGTA TCACCTTGCC GAAAGTTACC CACCCGTTCA TTACATTGCC
ACCGATAACT ATGCGCTGGT TGAAAGCGCA TTTTTGCATT TAAAAGAGAA AGGCGTTAAC
CGCTTTGCTT TTTATGGTCT TCCGGAATCA AGCGGCAAAC GTTGGGCCAC TGAACGCGAA
TATGCATTTC GTCAGCTTGT CGCCGAAGAA AAGTATCGCG GAGTGGTTTA TCAGGGGTTA
GAAACCGCGC CAGAGAACTG GCAACACGCG CAAAATCGGC TGGCAGACTG GCTACAAACG
CTGCCACCGC AAACCGGGAT TATTGCCGTT ACTGACGCCC GGGCACGGCA TATTCTGCAA
GTATGTGAAC ATCTACACAT TCCCGTACCG GAAAAATTAT GCGTGATTGG CATCGATAAC
GAAGAACTGA CCCGCTATCT GTCGCGTGTC GCCCTTTCTT CGGTCGCTCA GGGCGCACGG
CAAATGGGCT ATCAGGCGGC AAAACTGTTG CATCGATTAT TAGATAAAGA AGAAATGCCG
CTACAGCGGA TTTTGGTCCC ACCAGTTCGC GTCATTGAAC GGCGCTCAAC AGATTACCGC
TCGCTGACCG ATCCCGCCGT TATTCAGGCC ATGCATTACA TTCGTAATCA CGCCTGTAAA
GGGATTAAAG TGGATCAGGT ACTGGATGCG GTGGGCATAT CACGCTCCAA TCTTGAGAAG
CGTTTTAAAG AAGAGGTGGG TGAAACCATC CATGCAATGA TTCATGCCGA GAAGTTGGAG
AAAGCGCGCA GTCTGCTGAT TTCAACCACC TTGTCGATCA ATGAGATATC GCAAATGTGC
GGTTATCCAT CGCTGCAATA TTTCTACTCT GTTTTTAAAA AAGCATATGA CACGACGCCA
AAAGAGTATC GCGATGTAAA TAGCGAGGTC ATGTTGTAG
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| Protein sequence | MFTKRHRITL LFNANKAYDR QVVEGVGEYL QASQSEWDIF IEEDFRARID KIKDWLGDGV
IADFDDKQIE QALADVDVPI VGVGGSYHLA ESYPPVHYIA TDNYALVESA FLHLKEKGVN
RFAFYGLPES SGKRWATERE YAFRQLVAEE KYRGVVYQGL ETAPENWQHA QNRLADWLQT
LPPQTGIIAV TDARARHILQ VCEHLHIPVP EKLCVIGIDN EELTRYLSRV ALSSVAQGAR
QMGYQAAKLL HRLLDKEEMP LQRILVPPVR VIERRSTDYR SLTDPAVIQA MHYIRNHACK
GIKVDQVLDA VGISRSNLEK RFKEEVGETI HAMIHAEKLE KARSLLISTT LSINEISQMC
GYPSLQYFYS VFKKAYDTTP KEYRDVNSEV ML
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