| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3891 |
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| Symbol | xylH |
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| ID | 6147286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 3959878 |
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| End bp | 3961059 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641618717 |
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| Product | D-xylose ABC transporter, permease protein |
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| Protein accession | YP_001745856 |
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| Protein GI | 170683622 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4214] ABC-type xylose transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 74 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAAAA GCAATCCGTC TGAAGTGAAA TTAGCCGTAC CGACATCCGG TGGCTTTTCC
GGGCTGAAAT CACTGAATTT GCAGGTCTTC GTGATGATTG CAGCTATCAT CGCAATCATG
CTGTTCTTTA CCTGGACCAC CGATGGTGCC TACTTAAGCG CCCGTAACGT CTCCAACCTG
TTACGCCAAA CCGCGATTAC CGGCATCCTC GCGGTAGGAA TGGTGTTCGT CATAATTTCT
GCTGAAATCG ACCTTTCCGT CGGCTCAATG ATGGGGCTGT TAGGTGGCGT CGCGGCGATT
TGTGACGTCT GGCTAGGCTG GCCTTTGCCA CTTACCATCA TTGTGACTTT GGTTCTGGGA
CTGCTTCTCG GTGCCTGGAA CGGATGGTGG GTCGCGTACC GCAAAGTCCC TTCATTTATT
GTCACCCTCG CGGGCATGTT GGCATTTCGC GGCATACTCA TTGGCATCAC CAACGGCACG
ACTGTTTCCC CCACCAGCGC CGCGATGTCA CAAATCGGGC AAAGCTATCT ACCCGCCAGC
ACCGGCTTCA TCATTGGCGC GCTTGGCTTA ATGGCTTTTG TTGGCTGGCA ATGGCGCGGA
AGAATGCGCC GTCAGGCTTT GGGTTTGCAG TCTCCGGCTT CTACCGCAGT AGTCGGTCGC
CAGGCTTTAA CCGCTATCAT CGTATTAGGC GCAATCTGGC TGTTGAATGA TTACCGTGGC
GTTCCCACTC CTGTTCTGCT GCTGACGTTG CTGTTACTCG GCGGAATGTT TATGGCAACG
CGGACGGCAT TTGGACGACG CATTTATGCC ATCGGCGGCA ATCTGGAAGC AGCACGGCTC
TCCGGGATTA ACGTTGAACG CACCAAACTT GCCGTGTTCG CTATTAACGG ATTAATGGTA
GCCATCGCCG GATTAATCCT CAGTTCTCGA CTTGGCGCTG GTTCACCTTC TGCGGGAAAT
ATCGCCGAAC TGGACGCAAT TGCCGCATGT GTGATTGGCG GCACCAGTCT GGCAGGCGGC
GTCGGGAGCG TGGCCGGAGC GGTAATGGGG GCATTCATCA TGGCTTCACT GGATAACGGC
ATGAGTATGA TGGATGTACC GACCTTCTGG CAGTATATCG TTAAAGGTGC GATTCTGTTG
CTGGCAGTAT GGATGGACTC CGCAACCAAA CGCCGTTCTT GA
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| Protein sequence | MSKSNPSEVK LAVPTSGGFS GLKSLNLQVF VMIAAIIAIM LFFTWTTDGA YLSARNVSNL
LRQTAITGIL AVGMVFVIIS AEIDLSVGSM MGLLGGVAAI CDVWLGWPLP LTIIVTLVLG
LLLGAWNGWW VAYRKVPSFI VTLAGMLAFR GILIGITNGT TVSPTSAAMS QIGQSYLPAS
TGFIIGALGL MAFVGWQWRG RMRRQALGLQ SPASTAVVGR QALTAIIVLG AIWLLNDYRG
VPTPVLLLTL LLLGGMFMAT RTAFGRRIYA IGGNLEAARL SGINVERTKL AVFAINGLMV
AIAGLILSSR LGAGSPSAGN IAELDAIAAC VIGGTSLAGG VGSVAGAVMG AFIMASLDNG
MSMMDVPTFW QYIVKGAILL LAVWMDSATK RRS
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