| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3858 |
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| Symbol | |
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| ID | 6147299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 3927035 |
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| End bp | 3928306 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641618684 |
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| Product | serine transporter family protein |
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| Protein accession | YP_001745824 |
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| Protein GI | 170682329 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0814] Amino acid permeases |
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| TIGRFAM ID | [TIGR00814] serine transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCACA ACACACTACC GAAACACGAT CAGAAATTGC CGTTTACACG CTACGACTTC
GGCTGGGTTT TATTATGCAT AGGCATGGCG ATTGGTGCCG GAACCGTGCT GATGCCAGTA
CAAATTGGCT TGAAGGGAAT TTGGGTATTT ATTACCGCAG CGATCATTGC TTATCCTGCC
ACCTGGGTAG TGCAGGACAT TTATTTAAAA ACCCTTTCTG AAAGCGATTC CTGTAATGAC
TACACCGATA TTATCAGTCA TTACCTGGGG AAGAACTGGG GAATTTTCCT CGGGGTTATC
TACTTTTTGA TGATTATCCA CGGGATTTTT ATCTACTCTC TCTCCGTGGT TTTCGACAGC
GCCTCGTACC TGAAAACCTT CGGTTTAACC GATGCCGATC TTTCACAATC TCTACTTTAT
AAAGTCGCCA TTTTCGCCGT ACTGGTGGCA ATTGCGTCTG GTGGTGAACG ATTACTGTTT
AAGATTTCCG GGCCAATGGT GGTGGTCAAA GTAGGGATTA TCGTCGTGTT CGGTTTTGCG
ATGATCCCGC ACTGGAATTT CGCCAATATA ACCGCCTTCC CGCAAGCCTC CGTCTTTTTC
CGCGATGTCC TGCTTACCAT TCCCTTTTGC TTCTTTTCTG CGGTATTTAT TCAGGTACTT
AACCCAATGA ATATTGCCTA TCGTAAACGG GAAGCGGATA AAGTACTGGC AACCCGGCTC
GCGCTGCGTA CCCACCGAAT TAGTTATGTC ACGCTCATCG CGGTGATCCT GTTTTTTGCC
TTTTCGTTTA CCTTCTCAAT TAGCCACGAA GAAGCCGTTT CTGCCTTTGA ACAAAATATC
TCGGCACTGG CACTGGCCGC GCAGGTGATC CCTGGGCATA TCATTCATAT CACCTCTACG
GTGCTGAATA TCTTTGCCGT ACTGACCGCA TTCTTTGGCA TTTATCTCGG TTTCCACGAG
GCCATTAAAG GCATTATTCT CAATCTGTTA AGCCGAATTA TTGATACCAA GAAAATTAAT
TCACGCGTGC TGACTCTGGC GATCTGCGCT TTTATCGTCA TTACGTTGAC GATTTGGGTT
TCGTTTCGTG TATCGGTGCT GGTGTTCTTT CAGTTGGGAA GCCCGTTATA TGGCATTGTG
TCGTGCCTCA TTCCGTTTTT CCTGATCTAT AAAGTCGCAC AACTGGAAAA ACTTCGCGGA
TTTAAAGCCT GGCTGATTCT GCTTTACGGC ATTTTGCTAT GCTTGTCGCC ACTGTTGAAG
CTGATTGAGT AA
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| Protein sequence | MQHNTLPKHD QKLPFTRYDF GWVLLCIGMA IGAGTVLMPV QIGLKGIWVF ITAAIIAYPA
TWVVQDIYLK TLSESDSCND YTDIISHYLG KNWGIFLGVI YFLMIIHGIF IYSLSVVFDS
ASYLKTFGLT DADLSQSLLY KVAIFAVLVA IASGGERLLF KISGPMVVVK VGIIVVFGFA
MIPHWNFANI TAFPQASVFF RDVLLTIPFC FFSAVFIQVL NPMNIAYRKR EADKVLATRL
ALRTHRISYV TLIAVILFFA FSFTFSISHE EAVSAFEQNI SALALAAQVI PGHIIHITST
VLNIFAVLTA FFGIYLGFHE AIKGIILNLL SRIIDTKKIN SRVLTLAICA FIVITLTIWV
SFRVSVLVFF QLGSPLYGIV SCLIPFFLIY KVAQLEKLRG FKAWLILLYG ILLCLSPLLK
LIE
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