Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3828 |
Symbol | |
ID | 6145094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 3896905 |
End bp | 3898965 |
Gene Length | 2061 bp |
Protein Length | 686 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641618654 |
Product | AsmA family protein |
Protein accession | YP_001745794 |
Protein GI | 170680242 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.0975888 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAGG CAGGCAAAAT AACCGCTGCG ATTTCAGGGG CTTTCTTGTT GTTGATTGTC GTGGCGATCA TTTTGATTGC AACTTTTGAC TGGAATCGAC TCAAACCGAC CATCAACCAG AAAGTCTCTG CGGAGTTGAA TCGTCCGTTC GCTATCCGTG GCGATCTGGG CGTGGTGTGG GAGCGGCAAA AACAAGAAAC TGGCTGGCGC AGCTGGGTAC CGTGGCCCCA TGTACACGCG GAAGACATCA TTCTTGGCAA TCCACCGGAT ATTCCCGAAG TCACAATGGT GCATTTGCCG CGAGTAGAAG CGACGCTGGC CCCGCTGGAG CTGCTGACCA AAACGGTCTG GTTGCCGTGG ATCAAGCTCG AAAAGCCCGA CGCGCGCCTG ATTCGCCTCT CCGAAAAGAA CAATAACTGG ACGTTTAATC TCGGCAACGA TGACAACAAA GACGCGAATG CAAAGCCGTC GGCGTGGTCG TTTCGGCTGG ATAATATTCT GTTCGATCAA GGGCGGATCG CCATTGATGA CAAAGTAAGC AAAGCGGATC TGGAAATTTT TGTCGATCCG TTAGGCAAGC CGCTGCCGTT CAGCGAAGTT ACCGGATCGA AAGGTAAAGC GGATAAAGAA AAGGTGGGCG ATTACGTTTT TGGCCTGAAG GCGCAGGGAC GTTATAACGG TGAACCGCTC ACTGGTACGG GAAAAATAGG CGGTATGCTG GCGCTGCGTG GCGAAGGTAC GCCGTTTCCG GTACAGGCTG ATTTCCGCTC TGGTAACACC CGTGTTGCTT TTGATGGCGT TGTGAATGAC CCAATGAAGA TGGGGGGTGT CGATTTACGG CTTAAATTTT CTGGCGATTC GCTGGGTGAT CTCTATGAAC TGACGGGCGT TCTGCTGCCC GATACCCCGC CGTTTGAAAC GGATGGTCGG CTGGTAGCGA AAATCGACAC TGAAAAATCG TCGGTCTTTG ATTATCGCGG TTTTAATGGG CGCATTGGCG ATAGCGATAT CCACGGTTCT CTGATCTACA CCACCGGCAA GCCACGACCA AAACTGGAAG GTGATGTCGA GTCGCGGCAA TTGCGGCTGG CGGACCTGGG ACCGTTGATT GGCGTTGATT CCGGGAAAGG AGCTGAAAAG TCGACACGGT CTGAACAGAA GAAGGGTGAA AAAAGCGTTC AGCCTGCGGG CAAAGTGCTG CCTTATGACC GCTTCGAAAC CGATAAATGG GATGTCATGG ATGCCGATGT TCGCTTCAAA GGGCGGCGCA TTGAACATGG CAGTAGCCTG CCGATTAGCG ATCTTTCTAC TCATATCATC CTCAAAAATG CTGACCTGCG CCTGCAACCG CTGAAATTTG GCATGGCGGG CGGCAGCATT GCGGCGAATA TTCATCTGGA AGGCGATAAA AAGCCGATGC AGGGGCGGGC AGATATTCAG GCTCGTCGAC TGAAACTGAA AGAACTGATG CCCGATGTAG AACTGATGCA GAAGACGCTG GGGGAAATGA ACGGTGACGC GGAACTACGC GGTAGCGGTA ACTCGGTGGC GGCGCTTTTA GGCAACAGTA ACGGCAACCT GAAACTGTTG ATGAATGACG GGCTGGTGAG CCGCAACCTG ATGGAGATTG TCGGGCTGAA TGTCGGCAAC TACATTGTCG GTGCGATATT TGGTGACGAT GAGGTGCGGG TGAACTGCGC GGCGGCGAAT CTTGATATTG CCAACGGCGT GGCGCGCCCG CAGATCTTTG CTTTCGATAC GGAGAACGCG TTGATTAACG TTACCGGCAC GGCAAGTTTT GCTTCGGAAC AGCTGGATTT GACTATCGAT CCAGAAAGTA AAGGGATTCG GATTATCACA CTGCGTTCGC CGCTGTATGT GCGTGGGACG TTTAAAAATC CGCAGGCTGG GGTAAAAGCC GGACCGTTGA TTGCTCGCGG AGCCGTCGCG GCGGCACTGG CAACGCTGGT TACGCCAGCG GCGGCGTTAC TGGCGCTGAT CTCTCCTTCC GAAGGGGAGG CTAATCAGTG TCGGACGATT TTGTCGCAGA TGAAGAAGTG A
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Protein sequence | MSKAGKITAA ISGAFLLLIV VAIILIATFD WNRLKPTINQ KVSAELNRPF AIRGDLGVVW ERQKQETGWR SWVPWPHVHA EDIILGNPPD IPEVTMVHLP RVEATLAPLE LLTKTVWLPW IKLEKPDARL IRLSEKNNNW TFNLGNDDNK DANAKPSAWS FRLDNILFDQ GRIAIDDKVS KADLEIFVDP LGKPLPFSEV TGSKGKADKE KVGDYVFGLK AQGRYNGEPL TGTGKIGGML ALRGEGTPFP VQADFRSGNT RVAFDGVVND PMKMGGVDLR LKFSGDSLGD LYELTGVLLP DTPPFETDGR LVAKIDTEKS SVFDYRGFNG RIGDSDIHGS LIYTTGKPRP KLEGDVESRQ LRLADLGPLI GVDSGKGAEK STRSEQKKGE KSVQPAGKVL PYDRFETDKW DVMDADVRFK GRRIEHGSSL PISDLSTHII LKNADLRLQP LKFGMAGGSI AANIHLEGDK KPMQGRADIQ ARRLKLKELM PDVELMQKTL GEMNGDAELR GSGNSVAALL GNSNGNLKLL MNDGLVSRNL MEIVGLNVGN YIVGAIFGDD EVRVNCAAAN LDIANGVARP QIFAFDTENA LINVTGTASF ASEQLDLTID PESKGIRIIT LRSPLYVRGT FKNPQAGVKA GPLIARGAVA AALATLVTPA AALLALISPS EGEANQCRTI LSQMKK
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