Gene EcSMS35_3814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3814 
SymbolgadE 
ID6145350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3879011 
End bp3879538 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content33% 
IMG OID641618640 
Producttranscriptional regulator GadE 
Protein accessionYP_001745780 
Protein GI170684050 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.050045 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTTTC TCATGACGAA AGATTCTTTT CTTTTACAGG GCTTTTGGCA GTTGAAAGAT 
AATCACGAAA TGATAAAAAT CAATTCCCTG TCAGAGATCA AAAAAGTAGG CAATAAACCC
TTCAAGGTTA TCATTGATAC CTATCACAAT CATATCCTTG ATGAAGAAGC GATTAAATTT
CTGGAGAAAT TAGATGCCGA GAGAATTATT GTTTTGGCAC CTTATCACAT CAGTAAACTA
AAAGCTAAAG CGCCTATTTA TTTTGTCAGC CGTAAAGAAA GTATCAAAAA TCTTCTTGAG
ATTACTTATG GTAAACACTT GCCCCATAAG AATTCACAAC TATGTTTTTC ACATAATCAG
TTCAAAATTA TGCAACTGAT TCTGAAAAAC AAAAATGAAA GCAATATCAC GTCAACGCTC
AACATTTCGC AACAAACATT AAAGATTCAG AAATTCAACA TTATGTACAA GCTGAAATTA
AGACGTATGA GCGACATCGT CACCCTGGGT ATCACATCTT ATTTTTAG
 
Protein sequence
MIFLMTKDSF LLQGFWQLKD NHEMIKINSL SEIKKVGNKP FKVIIDTYHN HILDEEAIKF 
LEKLDAERII VLAPYHISKL KAKAPIYFVS RKESIKNLLE ITYGKHLPHK NSQLCFSHNQ
FKIMQLILKN KNESNITSTL NISQQTLKIQ KFNIMYKLKL RRMSDIVTLG ITSYF