Gene EcSMS35_3734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3734 
Symbol 
ID6146492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3803107 
End bp3803853 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content50% 
IMG OID641618560 
Producthypothetical protein 
Protein accessionYP_001745700 
Protein GI170684156 
COG category[S] Function unknown 
COG ID[COG4700] Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTATG CCGTTGTTGT CATGCTTGAA CTGCTTTGCT GTATTCACGC TTACCGTACC 
GGACAAGAGC GGTACTGGAT TTTTATCATT TTCTGTTTTC CGGTGATTGG CTGCGTGGCG
TATTTCGTCA TAGTGATGTT GCCTGAAACG GGCGCTGACC GTCACGGGCA TACTTTGCTG
ATGCGCCTGC AGGACAAACT CAACCCTGAG CGCCACCTGC GCAAATTAAC CGAAGAACTG
GCGATTGCCG AGACGAATCA AAACCATTAT GCGTTGGCTA ATGAACTGGT GTGTCTGGGG
CGTTATCACG AAGCTGTTCC CCATTATCAG CAGGCGTTAA GCGGGATATT CGTCCATGAA
GCGGCAATGA TGCTAAGCCT GGCGCAGGCG CAGTTTGCCA TTCAGGAGTT CGCCGCCTGT
CAGCAGACGC TGGAAGATGT GATGCGTTAT AACCCCGATT TTCAGTCGGC AGACGGGCAT
TTGTTATTTG CCAGAGCGTT AGCCGCACAA GAAAAATACG CTGATGCGGA AAGCGAGTTT
GAGGTGTTGA TTTCTTATTA CTCCGGCCCG CAGGCGCGTA TTTACTATGC GGAAATGTTG
GCGAAAATGA GTCGGTTACG TGAAGCCAAC GAGCAGTATA TTGCTGTGGT TGATACGGCT
AAACGTTCAA AACCACATTA TAGAAAACAC CACCGGGAAT GGATTAAGAC CGCCAATGAA
CGGCTGAAGC AGAGTGTGGT GCAATGA
 
Protein sequence
MHYAVVVMLE LLCCIHAYRT GQERYWIFII FCFPVIGCVA YFVIVMLPET GADRHGHTLL 
MRLQDKLNPE RHLRKLTEEL AIAETNQNHY ALANELVCLG RYHEAVPHYQ QALSGIFVHE
AAMMLSLAQA QFAIQEFAAC QQTLEDVMRY NPDFQSADGH LLFARALAAQ EKYADAESEF
EVLISYYSGP QARIYYAEML AKMSRLREAN EQYIAVVDTA KRSKPHYRKH HREWIKTANE
RLKQSVVQ