| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3724 |
|---|
| Symbol | |
|---|
| ID | 6144657 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 3793580 |
|---|
| End bp | 3794617 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641618550 |
|---|
| Product | putative dehydrogenase |
|---|
| Protein accession | YP_001745690 |
|---|
| Protein GI | 170681404 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCATTA ACTGCGCCTT TATTGGCTTC GGCAAAAGCA CCACCCGTTA CCATCTGCCG
TATGTACTTA ACCGCAAGGA TAGCTGGCAT GTCGCGCATA TTTTTCGCCG CCATGCGAAG
CCGGAAGAAC AGGCCCCCAT TTATTCCCAT ATCCATTTCA CCAGCGATCT CGACGAAGTG
CTAAACGATC CCGATGTTAA GCTGGTTGTC GTCTGCACCC ACGCGGACAG CCACTTCGAG
TACGCGAAGC GCGCGCTGGA AGCCGGGAAA AATGTGCTGG TCGAAAAACC GTTCACTCCG
ACAATTGCGC AGGCGAAAGA GCTGTTTGCA CTGGCGAAAA GCAAAGGGCT GATCGTTACG
CCGTATCAGA ATCGTCGCTT TGATTCCTGT TTCCTGACAG CGAAAAAAGC GATTGAAAGC
GGCAAGCTGG GAGAGATTGT CGAAGTGGAA AGCCATTTTG ACTATTACCG CCCGGTGGCA
GAAACCAAAC CTGGGCTGCC GCAGGATGGC GCGTTCTATG GCCTTGGTGT GCATACGATG
GACCAGATTA TTTCTCTGTT CGGTCGCCCG GATCACGTCG CTTATGACAT CCGCAGCCTG
CGTAATAAAG CCAATCCGGA CGACACCTTT GAAGCGCAGC TGTTTTATGG CGATCTAAAA
GCCATCGTCA AAACCAGCCA TCTGGTGAAA ATCGATTATC CGAAATTTAT CGTTCACGGT
AAGAAAGGTT CGTTTATTAA ATACGGTATC GACCAGCAGG AAACCAGCCT GAAGGCTAAT
ATTATGCCGG GCGAACCGGG ATTCGCAGCG GATGATTCGG TCGGTGTGCT GGAGTATGTC
AATGACGAGG GTGTGACGGT CAGAGAAGAG ATGAAGCCGG AGGTGGGCGA TTACGGGCGC
GTTTATGATG CGTTGTATCA AACCATCACC AACGGTGCGC CAAATTACGT CAAGGAATCT
GAAGTTCTTA CCAATTTGGA AATCCTTGAA CGCGGTTTTG AGCAAGCCTC TCCCTCCACA
GTGACTCTCG CGAAGTAA
|
|---|
| Protein sequence | MVINCAFIGF GKSTTRYHLP YVLNRKDSWH VAHIFRRHAK PEEQAPIYSH IHFTSDLDEV
LNDPDVKLVV VCTHADSHFE YAKRALEAGK NVLVEKPFTP TIAQAKELFA LAKSKGLIVT
PYQNRRFDSC FLTAKKAIES GKLGEIVEVE SHFDYYRPVA ETKPGLPQDG AFYGLGVHTM
DQIISLFGRP DHVAYDIRSL RNKANPDDTF EAQLFYGDLK AIVKTSHLVK IDYPKFIVHG
KKGSFIKYGI DQQETSLKAN IMPGEPGFAA DDSVGVLEYV NDEGVTVREE MKPEVGDYGR
VYDALYQTIT NGAPNYVKES EVLTNLEILE RGFEQASPST VTLAK
|
|---|
| |