| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3713 |
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| Symbol | glgX |
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| ID | 6146321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3779732 |
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| End bp | 3781705 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641618539 |
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| Product | glycogen debranching enzyme |
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| Protein accession | YP_001745679 |
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| Protein GI | 170679803 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.723997 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.535779 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAAC TCGCCATTGG CAAACCCACT CCCCTCGGCG CGCATTACGA CGGTCAGGGC
GTCAATTTCA CACTTTTCTC CGCTCATGCC GAGCGGGTAG AGCTGTGTGT CTTTGACGCC
AATGGCCAGG AACATCGCTA TGACTTGCCA GGGCACAGTG GCGACATTTG GCACGGTTAT
CTGCCGGATG CGCGTCCGGG TTTGCGTTAT GGTTATCGCG TTCATGGCCC CTGGCAACCC
GCCGAGGGGC ATCGCTTTAA CCCGGCGAAG TTGTTGATTG ATCCTTGCGC GCGGCAAATT
GACGGGGAGT TTAAAGATAA CCCGCTGCTA CACGCCGGTC ATAATGAACC TGACTATCGC
GACAACGCCG CCATTGCGCC GAAATGCGTA GTGGTGGTTG ATCACTATGA CTGGGAGGAT
GATGCCCCGC CGCGCACGCC GTGGGGCAGC ACCATCATTT ATGAAGCCCA TGTCAAAGGA
TTAACGTACC TGCACCCGGA GATCCCGGTC GAGATCCGTG GCACTTATAA AGCCCTGGGG
CATCCGGTGA TGATCAACTA TTTGAAACAG TTGGGCATTA CCGCGCTGGA ACTGCTGCCG
GTGGCGCAGT TTGCCAGCGA ACCACGCCTG CAACGTATGG GTCTAAGTAA CTACTGGGGT
TATAACCCGG TGGCGATGTT TGCGCTGCAT CCGGCGTATG CCTGCTCCCC AGAAACGGCG
CTGGATGAGT TTCGCGATGC AATCAAAGCA CTGCATAAAG CGGGTATCGA AGTCATTCTT
GATATCGTGC TCAACCATAG TGCGGAACTG GACCTCGACG GTCCGTTATT CTCTCTGCGT
GGGATCGACA ACCGTAGCTA TTATTGGATA AGAGAAGACG GCGATTATCA CAACTGGACC
GGTTGTGGCA ACACGCTCAA TTTGAGTCAT CCGGCGGTAG TGGATTATGC CAGCGCTTGC
CTGCGTTATT GGGTAGAAAC CTGCCACGTC GATGGTTTCC GCTTTGATCT GGCGGCAGTC
ATGGGCCGTA CGCCAGAGTT CCGTCAGGAT GCGCCGTTGT TTACCGCTAT CCAGAACTGC
CCGGTGCTCT CGCAGGTGAA GTTAATTGCT GAACCGTGGG ATATTGCTCC TGGTGGTTAT
CAGGTGGGAA ATTTCCCGCC GCTGTTTGCC GAGTGGAACG ATCATTTCCG CGATGCTGCC
CGTCGTTTCT GGCTTCATTA TGATTTGCCT CTGGGGGCGT TTGCCGGGCG TTTTGCTGCC
TCCAGCGATG TTTTTAAACG TAATGATCGT CTGCCGAGTG CCGCGATTAA TCTCGTCACC
GCGCATGACG GTTTTACGCT TCGCGACTGC GTTTGCTTCA ACCATAAACA CAATGAAGCA
AACGGAGAAG AAAATCGCGA CGGGACCAAC AACAATTACA GTAACAATCA TGGTAAAGAA
GGGTTAGGCG GTACTCTTGA CCTGGTTGAA CGGCGTCGCG ACAGCATTCA CGCCCTGTTA
ACAACGTTGT TGCTCTCCCA GGGTACGCCG ATGTTACTGG CCGGTGACGA ACATGGTCAC
AGCCAGCATG GCAATAACAA TGCCTACTGT CAGGATAACC AATTAACCTG GTTGGACTGG
TCGCAGGCAA GCAGTGGTTT AACCGCATTT ACCGCCGCGT TAATCCATCT GCGCAAGCGC
ATTCCCGCTT TGGTGGAGAA TCGCTGGTGG GAAGAAGGCG ACGGCAATGT CCGTTGGCTA
AATCGATATG CTCAACCTTT AAGCACGGAT GAGTGGCAAA ACGGGCCGAA ACAGCTGCAA
ATTCTGCTCT CGGATCGCTT TTTGATCGCA ATTAACGCCA CGCTTGAGGT AACAGAGATT
GTTTTACCTG CTGGGGAGTG GCACGCCATT CCCCCATTCG CTGGAGAGGA TAACCCAGTG
ATTACGGCTG TCTGGCAGGG ACCTGCACAC GGATTGTGTG TGTTCCAGAG ATGA
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| Protein sequence | MTQLAIGKPT PLGAHYDGQG VNFTLFSAHA ERVELCVFDA NGQEHRYDLP GHSGDIWHGY
LPDARPGLRY GYRVHGPWQP AEGHRFNPAK LLIDPCARQI DGEFKDNPLL HAGHNEPDYR
DNAAIAPKCV VVVDHYDWED DAPPRTPWGS TIIYEAHVKG LTYLHPEIPV EIRGTYKALG
HPVMINYLKQ LGITALELLP VAQFASEPRL QRMGLSNYWG YNPVAMFALH PAYACSPETA
LDEFRDAIKA LHKAGIEVIL DIVLNHSAEL DLDGPLFSLR GIDNRSYYWI REDGDYHNWT
GCGNTLNLSH PAVVDYASAC LRYWVETCHV DGFRFDLAAV MGRTPEFRQD APLFTAIQNC
PVLSQVKLIA EPWDIAPGGY QVGNFPPLFA EWNDHFRDAA RRFWLHYDLP LGAFAGRFAA
SSDVFKRNDR LPSAAINLVT AHDGFTLRDC VCFNHKHNEA NGEENRDGTN NNYSNNHGKE
GLGGTLDLVE RRRDSIHALL TTLLLSQGTP MLLAGDEHGH SQHGNNNAYC QDNQLTWLDW
SQASSGLTAF TAALIHLRKR IPALVENRWW EEGDGNVRWL NRYAQPLSTD EWQNGPKQLQ
ILLSDRFLIA INATLEVTEI VLPAGEWHAI PPFAGEDNPV ITAVWQGPAH GLCVFQR
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