| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3671 |
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| Symbol | |
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| ID | 6143061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3728222 |
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| End bp | 3728761 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641618498 |
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| Product | PilN family protein |
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| Protein accession | YP_001745638 |
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| Protein GI | 170683225 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3166] Tfp pilus assembly protein PilN |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000206166 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.11524 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCGC CAATTAATTT TTTGCCCTGG CGACAGCAAC GCCGGACCGC TTTTCTGCGT
TTCTGGTTGC TGATGTTCGT TGCGCCTCTG CTGCTGGCCG TCGGGATTAC GCTAATAATG
CGTCTGACAA GCAACGCCGA AGCACGCGTA AACGCCGTTT TGCTTCAGGC GGAACAACAA
CTCGCTCGCA GCTTACAGAT AACGAAACCA CGTTTGCTGG AGCAACAGCA GTTACGCGAA
CAGCGTTTGC AAAGGCAGCG CCAGCGACAA TTTACCCGCG ACTGGCAATC TGCGCTGGAA
GCACTGGCGG CGCTTTTACC CGAGCACGCC TGGCTGACAA CGATAAGCTG GCAGCAGGGA
ACGCTGGAGA TCAAGGGGCT GACAACAAGC ATTACCGCGT TAAACGCACT AGAAACGTCA
CTCCGCCAGG ATGCATCTTT TCATCTCAAT CAGCGGGGGG CCACGCAGCA GGATGCGCAG
GGACGCTGGC AATTTGAGTA TCAGTTAACA AGGAAGGTTA GCGATGGACA TGCTCTTTGA
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| Protein sequence | MNPPINFLPW RQQRRTAFLR FWLLMFVAPL LLAVGITLIM RLTSNAEARV NAVLLQAEQQ
LARSLQITKP RLLEQQQLRE QRLQRQRQRQ FTRDWQSALE ALAALLPEHA WLTTISWQQG
TLEIKGLTTS ITALNALETS LRQDASFHLN QRGATQQDAQ GRWQFEYQLT RKVSDGHAL
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