Gene EcSMS35_3655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3655 
Symbol 
ID6145283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3714631 
End bp3715509 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content53% 
IMG OID641618482 
Productputative hydrolase 
Protein accessionYP_001745622 
Protein GI170680454 
COG category[R] General function prediction only 
COG ID[COG1735] Predicted metal-dependent hydrolase with the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0000683882 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTTTTG ATCCGACGGG TTACACCCTG GCCCATGAGC ATCTGCATAT TGATCTTTCC 
GGCTTTAAAA ACAACGTGGA CTGCCGCCTT GATCAGTATG CGTTCATTTG CCAGGAGATG
AACGACCTGA TGGCCCGGGG CGTGCGTAAT GTGATTGAAA TGACCAACCG TTACATGGGG
CGCAATGCGC AATTTATGCT CGATGTAATG CGTGAAACCG GGATCAACGT GGTGGCCTGT
ACCGGTTATT ACCAGGACGC GTTTTTCCCG GAACATGTGG CGACCCGCAG CGTGCAGGAA
CTGGCGCAGG AGATGGTCGA TGAAATTGAG CAGGGTATCG ATGGCACTGA CCTGAAAGCC
GGAATTATCG CGGAGATCGG CTCCAGCGAA GGGAAGATTA CGTCGCTAGA AGAGAAGGTG
TTTATTGCCG CCGCGCTGGC GCATAACCAG ACCGGACGCC CGATCTCCAC GCATACGTCG
TTCAGCACGA TGGGGCTGGA GCAACTGGCT CTGTTGCAAG CCCACGGAGT TGATCTTTCG
CGCGTCACCG TCGGCCACTG CGATCTGAAA GACAATCTCG ACAACATTTT GAAGATGATC
GATCTCGGCG CGTATGTGCA GTTCGACACC ATCGGCAAGA ACAGTTACTA CCCGGACGAA
AAGCGGATTG CGATGCTCCA TGCGCTACGT GACCGTGGGT TGCTGAACCG CGTCATGCTG
TCGATGGATA TTACGCGGCG CTCTCATTTA AAAGCCAACG GTGGTTATGG CTATGACTTT
TTATTGACCA CCTTTATTCC GCAATTGCGC CAGTCAGGAT TCAGTCAGGC CGATGTGGAT
GTGATGTTAC GTGAAAATCC CTCTCAATTT TTCCAATAA
 
Protein sequence
MSFDPTGYTL AHEHLHIDLS GFKNNVDCRL DQYAFICQEM NDLMARGVRN VIEMTNRYMG 
RNAQFMLDVM RETGINVVAC TGYYQDAFFP EHVATRSVQE LAQEMVDEIE QGIDGTDLKA
GIIAEIGSSE GKITSLEEKV FIAAALAHNQ TGRPISTHTS FSTMGLEQLA LLQAHGVDLS
RVTVGHCDLK DNLDNILKMI DLGAYVQFDT IGKNSYYPDE KRIAMLHALR DRGLLNRVML
SMDITRRSHL KANGGYGYDF LLTTFIPQLR QSGFSQADVD VMLRENPSQF FQ