Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3655 |
Symbol | |
ID | 6145283 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 3714631 |
End bp | 3715509 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641618482 |
Product | putative hydrolase |
Protein accession | YP_001745622 |
Protein GI | 170680454 |
COG category | [R] General function prediction only |
COG ID | [COG1735] Predicted metal-dependent hydrolase with the TIM-barrel fold |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0000683882 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAGTTTTG ATCCGACGGG TTACACCCTG GCCCATGAGC ATCTGCATAT TGATCTTTCC GGCTTTAAAA ACAACGTGGA CTGCCGCCTT GATCAGTATG CGTTCATTTG CCAGGAGATG AACGACCTGA TGGCCCGGGG CGTGCGTAAT GTGATTGAAA TGACCAACCG TTACATGGGG CGCAATGCGC AATTTATGCT CGATGTAATG CGTGAAACCG GGATCAACGT GGTGGCCTGT ACCGGTTATT ACCAGGACGC GTTTTTCCCG GAACATGTGG CGACCCGCAG CGTGCAGGAA CTGGCGCAGG AGATGGTCGA TGAAATTGAG CAGGGTATCG ATGGCACTGA CCTGAAAGCC GGAATTATCG CGGAGATCGG CTCCAGCGAA GGGAAGATTA CGTCGCTAGA AGAGAAGGTG TTTATTGCCG CCGCGCTGGC GCATAACCAG ACCGGACGCC CGATCTCCAC GCATACGTCG TTCAGCACGA TGGGGCTGGA GCAACTGGCT CTGTTGCAAG CCCACGGAGT TGATCTTTCG CGCGTCACCG TCGGCCACTG CGATCTGAAA GACAATCTCG ACAACATTTT GAAGATGATC GATCTCGGCG CGTATGTGCA GTTCGACACC ATCGGCAAGA ACAGTTACTA CCCGGACGAA AAGCGGATTG CGATGCTCCA TGCGCTACGT GACCGTGGGT TGCTGAACCG CGTCATGCTG TCGATGGATA TTACGCGGCG CTCTCATTTA AAAGCCAACG GTGGTTATGG CTATGACTTT TTATTGACCA CCTTTATTCC GCAATTGCGC CAGTCAGGAT TCAGTCAGGC CGATGTGGAT GTGATGTTAC GTGAAAATCC CTCTCAATTT TTCCAATAA
|
Protein sequence | MSFDPTGYTL AHEHLHIDLS GFKNNVDCRL DQYAFICQEM NDLMARGVRN VIEMTNRYMG RNAQFMLDVM RETGINVVAC TGYYQDAFFP EHVATRSVQE LAQEMVDEIE QGIDGTDLKA GIIAEIGSSE GKITSLEEKV FIAAALAHNQ TGRPISTHTS FSTMGLEQLA LLQAHGVDLS RVTVGHCDLK DNLDNILKMI DLGAYVQFDT IGKNSYYPDE KRIAMLHALR DRGLLNRVML SMDITRRSHL KANGGYGYDF LLTTFIPQLR QSGFSQADVD VMLRENPSQF FQ
|
| |