| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3336 |
|---|
| Symbol | |
|---|
| ID | 6145463 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 3413802 |
|---|
| End bp | 3414590 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641618165 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001745315 |
|---|
| Protein GI | 170680476 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3384] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTCAA CACGTATGCC AGCATTGTTT TTAGGTCACG GTAGTCCGAT GAACGTGCTG
GAAGATAATT TGTATACCCG CAGCTGGCAG ACGTTGGGGA TGACATTGCC ACGCCCGCAA
GCAATAGTGG TGGTTTCGGC TCACTGGTTT ACCCGTGGAA CAGGAGTGAC CGCGATGGAG
ACGCCGCCCA CGATTCATGA CTTTGGTGGC TTCCCGCAGG CGCTGTACGA TACGCATTAT
CCTGCTCCGG GTTCACCTGC GCTGGCACAG CATCTGGTTG AGCTGTTAGC GCCGGTCCCT
GTGACGCTGG ATAAAGAAGC CTGGGGCTTC GACCACGGCT CGTGGGGCGT ACTGATTAAG
ATGTATCCTG ACGCCGATAT CCCGATGGTG CAGTTGAGTA TCGACAGTAG CAAACCTGCC
GCCTGGCATT TCGAAATGGG GCGCAAACTC GCGGCGCTGC GTGATGAAGG GATAATGTTG
GTCGCCAGTG GCAACGTGGT GCATAACCTG CGTACAGTGA AGTGGCACGG TGATAGTTCA
CCGTATCCGT GGGCGACGTC GTTTAATGAG TATGTGAAAG CGAATCTGAC GTGGCAAGGG
CCGGTGGAAC AACATCCTCT GGTGAATTAT CTCGACCATG AAGGTGGCGC GTTATCGAAC
CCAACGCCAG AGCACTATCT GCCGTTGTTG TATGTCTTAG GTGCGTGGGA TGGGCAGGAG
CCAATTACCA TTCCGGTCGA TGGTATAGAA ATGGGCAGTT TAAGTATGCT GTCGGTGCAG
ATAGGTTAA
|
|---|
| Protein sequence | MSSTRMPALF LGHGSPMNVL EDNLYTRSWQ TLGMTLPRPQ AIVVVSAHWF TRGTGVTAME
TPPTIHDFGG FPQALYDTHY PAPGSPALAQ HLVELLAPVP VTLDKEAWGF DHGSWGVLIK
MYPDADIPMV QLSIDSSKPA AWHFEMGRKL AALRDEGIML VASGNVVHNL RTVKWHGDSS
PYPWATSFNE YVKANLTWQG PVEQHPLVNY LDHEGGALSN PTPEHYLPLL YVLGAWDGQE
PITIPVDGIE MGSLSMLSVQ IG
|
|---|
| |