| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3315 |
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| Symbol | qseC |
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| ID | 6143276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 3392340 |
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| End bp | 3393689 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641618144 |
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| Product | sensor protein QseC |
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| Protein accession | YP_001745294 |
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| Protein GI | 170682051 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.0769555 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTTA CCCAACGTCT TAGTCTGCGA GTCAGGCTAA CGCTAATCTT TTTAATTCTG
GCCTCGGTGA CCTGGCTGCT TTCCAGCTTT GTCGCCTGGA AACAAACAAC GGATAACGTC
GATGAGTTGT TCGACACCCA ACTGATGCTG TTTGCCAAAC GGTTAAGTAC GCTCGATCTC
AACGAAATCA ACGCGGCGGA TCGCATGGCA CAGACGCCAA ATAAATTAAA ACACGGTCAT
GTTGATGACG ATGCGCTGAC CTTTGCCATC TTTACCCACG ACGGCAGAAT GGTCCTTAAC
GATGGCGATA ATGGAGAAGA TATTCCTTAT AGCTATCAAC GAGAAGGTTT TGCTGACGGG
CAACTGGTGG GCGATAAAGA TCAATGGCGT TTTGTCTGGA TGACCTCACC TGATGGCAAA
TATCGCATTG TTGTTGGTCA GGAATGGGAA TACCGTGAAG ACATGGCGCT GGCGATTGTT
GCCGGACAAT TGATCCCGTG GCTGGTCGCA CTGCCGATTA TGTTAATCAT CATGATGGTA
CTACTGGGTC GTGAACTCGC GCCGCTGAAC AAACTGGCGC TGGCACTACG TATGCGTGAC
CCAGACTCGG AAAAACCACT AAACGCGACG GGCGTACCCA GCGAAGTGCG CCCACTGGTT
GAGTCGTTGA ATCAACTGTT CGCCCGCACA CATGCGATGA TGGTTCGTGA ACGACGCTTT
ACCTCCGACG CAGCTCACGA ACTTCGTAGC CCGTTAACGG CGCTGAAAGT GCAAACCGAA
GTTGCTCAGC TCTCTGACGA TGATCCGCAG GCGCGGAAAA AAGCGCTGCT CCAATTACAT
TCCGGGATCG ATCGCGCTAC TCGTCTGGTT GATCAACTGC TCACGCTATC GCGGCTGGAC
TCACTGGATA ACCTTCAGGA CGTCGCGGAG ATCCCGCTTG AAGATCTCCT GCAATCGTCG
GTGATGGATA TTTACCACAC GGCGCAGCAG GCGAAAATTG ACGTGCGACT GACACTCAAT
GCCCACGGCA TCAAACGCAC CGGACAACCG CTGTTGCTAA GTTTGTTGGT ACGAAACCTT
CTGGATAACG CCGTGCGCTA CAGTCCACAG GGCTGCGTGG TGGACGTCAC GCTGAATGCC
GATAATTTCA TCGTGAAGGA TAACGGCCCC GGTGTGACGC CAGAGGCACT GGCGAGAATT
GGCGAACGCT TCTATCGCCC ACCCGGACAA ACCGCTACCG GCAGTGGACT TGGGCTTTCA
ATTGTCCAGC GAATCGCCAA GCTGCATGAC ATGAATGTTG AGTTTGGGAA TGCGGAACAA
GGTGGATTTG AGGCGAAAGT AAGCTGGTAA
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| Protein sequence | MKFTQRLSLR VRLTLIFLIL ASVTWLLSSF VAWKQTTDNV DELFDTQLML FAKRLSTLDL
NEINAADRMA QTPNKLKHGH VDDDALTFAI FTHDGRMVLN DGDNGEDIPY SYQREGFADG
QLVGDKDQWR FVWMTSPDGK YRIVVGQEWE YREDMALAIV AGQLIPWLVA LPIMLIIMMV
LLGRELAPLN KLALALRMRD PDSEKPLNAT GVPSEVRPLV ESLNQLFART HAMMVRERRF
TSDAAHELRS PLTALKVQTE VAQLSDDDPQ ARKKALLQLH SGIDRATRLV DQLLTLSRLD
SLDNLQDVAE IPLEDLLQSS VMDIYHTAQQ AKIDVRLTLN AHGIKRTGQP LLLSLLVRNL
LDNAVRYSPQ GCVVDVTLNA DNFIVKDNGP GVTPEALARI GERFYRPPGQ TATGSGLGLS
IVQRIAKLHD MNVEFGNAEQ GGFEAKVSW
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