Gene EcSMS35_3261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3261 
Symbol 
ID6143318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3340463 
End bp3341377 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content54% 
IMG OID641618091 
ProductNAD dependent epimerase/dehydratase family protein 
Protein accessionYP_001745241 
Protein GI170680110 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAAA CTGTCGCGGT GACGGGCGCT ACCGGGTTTA TCGGTAAATA TATTATTGAT 
AACCTGCTCG CCTGCGGCTT TCACGTTCGC GCATTGACGC GTACTGCCCG CGCTCACGTC
AATGATAATC TCACTTGGGT GCGCGGTTCG CTGGAAGATA CACATTCGCT TAGCGAACTG
GTTACCGGAG CCAGCGCGGT GGTCCATTGC GCCGGGCAAG TGCGCGGGCA CAAAGAAGAG
ATTTTTACCC GCTGCAACGT TGACGGCAGC CTGCGCCTGA TGCAAGCGGC AAAAGAGAGC
GGCTTTTGCC AACGTTTTCT GTTTATCTCT TCGCTGGCGG CGCGCCATCC CGAACTCTCC
TGGTACGCAA ATTCCAAACA CGTCGCCGAA CAACAGCTGA CTGCAATGGC TGACGAAATT
ACGTTGGGCG TTTTTCGCCC GACAGCCGTG TATGGTCCCG GCGATAAAGA GTTAAAACCG
CTGTTTGACT GGATGCTGCG CGGTCTGCTG CCACGACTTG GCACGCCAGA GACACAGCTC
TCTTTCCTGC ACGTCACCGA TTTTGCGCAA GCAGTGGGTC AGTGGTTAAG CGCCGAAACT
GTACAGACGC AAACCTATGA ATTATGCGAT GGCGTCGCCG GAGGCTATGA CTGGCAACGT
GTCCAACAGC TTGTTGCCGA TGTCCGCTGT GGTTCCGTGC GGATGGTCGG TATTCCTCTG
CCGCTACTCA CCTGCCTTGC GGATATCAGT ACCGCGTTGA GCCGTCTGGC GGGTAAAGAA
CCGATGCTGA CTCGTTCGAA AATCCGTGAA TTAACCCATG CCGACTGGTC GGCAAGTAAT
AACCGTATTT CTGAAGATAT TAATTGGTTT CCCGGGATTA GCCTGGAACA CGCATTACGC
AACGGGCTAT TTTGA
 
Protein sequence
MNQTVAVTGA TGFIGKYIID NLLACGFHVR ALTRTARAHV NDNLTWVRGS LEDTHSLSEL 
VTGASAVVHC AGQVRGHKEE IFTRCNVDGS LRLMQAAKES GFCQRFLFIS SLAARHPELS
WYANSKHVAE QQLTAMADEI TLGVFRPTAV YGPGDKELKP LFDWMLRGLL PRLGTPETQL
SFLHVTDFAQ AVGQWLSAET VQTQTYELCD GVAGGYDWQR VQQLVADVRC GSVRMVGIPL
PLLTCLADIS TALSRLAGKE PMLTRSKIRE LTHADWSASN NRISEDINWF PGISLEHALR
NGLF