| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3092 |
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| Symbol | |
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| ID | 6145936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3180993 |
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| End bp | 3182018 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641617960 |
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| Product | twitching motility family protein |
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| Protein accession | YP_001745111 |
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| Protein GI | 170680393 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0000184946 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCCAGGTT ATGCGCAATA TCGTTCATTT TCCGAGGATC TTAGTATGAA TATGGAAGAA
ATTGTGGCCC TTAGTGTAAA GCATAACGTC TCGGATCTAC ACCTGTGCAG CGCCTGGCCC
GCACGATGGC GCATTCGCGG CAGAATGGAA GCTGCGCCGT TTGACGCGCC GGACGTCGAA
GAGCTACTGC GGGAGTGGCT GGATGACGAT CAGCGGGCAA TATTGCTGGA GAATGGTCAG
CTGGATTTTG CTGTGTCGCT GGCGGAAAAC CAGCGGTTGC GTGGCAGTGC GTTCGCGCAA
CGGCAAGGTA TTTCTCTGGC ATTACGGTTG TTACCTTCGC ACTGTCCACA GCTCGAACAG
CTTGGTGCGC CACCGGTATT GCCGGAATTA CTCAAGAGCG AGAATGGCCT GATTCTGGTG
ACGGGGGCGA CGGGGAGCGG CAAATCTACC ACGCTGGCGG CGATGGTTGG CTATCTCAAT
CAACATGCCG ATGCGCATAT TCTGACGCTG GAAGATCCTG TTGAATATCT CTATGCCAGC
CAGCGATGTT TGATCCAGCA GCGGGAAATT GGTTTGCACT GTATGACGTT CGCATCGGGA
TTGCGGGCCG CATTGCGGGA AGATCCCGAT GTGATTTTGC TCGGAGAGCT GCGTGACAGC
GAGACAATCC GTCTGGCGCT GACGGCAGCA GAAACCGGAC ACCTGGTGCT GGCAACTTTA
CATACGCGTG GTGCGGCGCA GGCAGTTGAG CGGCTGGTGG ATTCATTTCC GGCGCAGGAA
AAAGATCCCG TGCGTAATCA ACTGGCAGGT AGTTTACGGG CGGTGTTGTC ACAAAAGCTG
GAAGTGGATA AACAGGAAGG ACGCGTGGCG CTGTTTGAAT TGCTGGTTAA CACACCCGCG
GTGGGGAATT TGATTCGCGA AGGGAAAACC CACCAGTTAC TGCATGTTAT TCAAACCGGG
CAGCAGGTGG GGATGTTAAC GTTTCAGCAG AGTTATCAGC AGCGGGTGGG GGAAGGACGT
TTGTGA
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| Protein sequence | MPGYAQYRSF SEDLSMNMEE IVALSVKHNV SDLHLCSAWP ARWRIRGRME AAPFDAPDVE
ELLREWLDDD QRAILLENGQ LDFAVSLAEN QRLRGSAFAQ RQGISLALRL LPSHCPQLEQ
LGAPPVLPEL LKSENGLILV TGATGSGKST TLAAMVGYLN QHADAHILTL EDPVEYLYAS
QRCLIQQREI GLHCMTFASG LRAALREDPD VILLGELRDS ETIRLALTAA ETGHLVLATL
HTRGAAQAVE RLVDSFPAQE KDPVRNQLAG SLRAVLSQKL EVDKQEGRVA LFELLVNTPA
VGNLIREGKT HQLLHVIQTG QQVGMLTFQQ SYQQRVGEGR L
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