Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3071 |
Symbol | |
ID | 6145791 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 3159664 |
End bp | 3160173 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641617940 |
Product | putative DNA-binding transcriptional regulator |
Protein accession | YP_001745091 |
Protein GI | 170679690 |
COG category | [K] Transcription |
COG ID | [COG3722] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.0270889 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGACGC TGACAGAAGA TGATGTGCTT GAGCAACTGG AGGCACAGGA CAATTTATTT TCATTTATGA AAACGGCGCA TTCTATTTTG CTCCAGGGGA TACGCCAGTT TCTACCGTCG CTGTTTGTCG ATAACGATGA AGAGATCGTC GAATATGCAG TGAAGCCGTT ACTCGCCCAA AGCGGCCCGC TTGACGATAT TGATGTTGCA CTGCGTTTGA TTTATGCGCT GGGGAAAATG GATAAATGGC TGTACGCCGA TATCACGCAC TTTTCCCAGT TCTGGCATTA CCTGAACGAA CAGAATGAAA TGCCCGGATT TGCCGATGAT ATGACCTGGG ATTTTATCAG CAACGTCAAT AGCATAACCC GCAATGCGAC GCTCTATGAC GCGTTGAAAG CGATGAAGTT CGCCGATTTC GCCGTCTGGT CAGAGGCGCG TTTTAGCGGG ATGGTCAAAA CGGCGCTGAC GCTGGCAGTA ACGACCACCT TAAAGGAATT AACGCCGTGA
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Protein sequence | MATLTEDDVL EQLEAQDNLF SFMKTAHSIL LQGIRQFLPS LFVDNDEEIV EYAVKPLLAQ SGPLDDIDVA LRLIYALGKM DKWLYADITH FSQFWHYLNE QNEMPGFADD MTWDFISNVN SITRNATLYD ALKAMKFADF AVWSEARFSG MVKTALTLAV TTTLKELTP
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