Gene EcSMS35_3009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3009 
Symbol 
ID6144388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3093088 
End bp3093858 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content50% 
IMG OID641617878 
Producthypothetical protein 
Protein accessionYP_001745029 
Protein GI170680868 
COG category 
COG ID 
TIGRFAM ID[TIGR03172] probable selenium-dependent hydroxylase accessory protein YqeC 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAAGTA TAGTTGACCC ATCGGCATTA TTCATTGATT TAGGCGCGCA GAAACGTCCC 
ACTGTGATTT CTGTTGTTGG GGCTGGGGGG AAAACCAGCT TGCTTTTTTG GCTGGCAGAA
CTGCTCCAGG CTAGCGGCAG GCGTGTGTTA ATCACTACGA CGACACATAT GTTTATGCCA
ACGTCTCACT GGCCCGTGGT TTTCTGTCGT GATCCCGCCA TGCTTCCTCA TGCGTCTCTT
ACATCCCCCA TTTCATTTTG TTTTCACAGC TGGAAAGCGA ACCAGGGAAA AGTGCAGGGA
TTTACGCCAG AAGCGATTGA TGCACTGGTG CAACGACCAG AGTGTGACGT AATTCTCATT
GAGGCAGATG GCTCGCGTGG AATGACGTTA AAAGCGCCTG ATGAGCACGA ACCTTGCATA
CCCAAAAGCA GTTGCTGCGT GATTGCTGTG ATGGGAGGAC ATATTTTGGG CGCGAAAGTG
AGCACAGAAA ATGTCCATCG CTGGTCGCAG TTTGCTGATA TTACCGGGTT AACACCTGAT
GCAACCTTGC AACTGAGCGA TCTCGTTGCG CTGGTTCGCC ACCCTCAGGG CGCATTTAAA
AACGTACCGC AAGGTTGTCG GCGAGTCTGG TTCATTAACC GTTTTTCTCA ATGTGAGAAT
GCGATTGCAC AAAGCGAGCT CCTTCAACCG CTGCAACAAC ACGACGTAGA GGCAATCTGG
CTGGGCGATA TACAAGAACA TCCTGCAATC GCGCGCAGAT TTGTGAATTA G
 
Protein sequence
MKSIVDPSAL FIDLGAQKRP TVISVVGAGG KTSLLFWLAE LLQASGRRVL ITTTTHMFMP 
TSHWPVVFCR DPAMLPHASL TSPISFCFHS WKANQGKVQG FTPEAIDALV QRPECDVILI
EADGSRGMTL KAPDEHEPCI PKSSCCVIAV MGGHILGAKV STENVHRWSQ FADITGLTPD
ATLQLSDLVA LVRHPQGAFK NVPQGCRRVW FINRFSQCEN AIAQSELLQP LQQHDVEAIW
LGDIQEHPAI ARRFVN