Gene EcSMS35_2915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2915 
Symbol 
ID6145869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2987511 
End bp2988395 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content43% 
IMG OID641617784 
Producthypothetical protein 
Protein accessionYP_001744939 
Protein GI170683146 
COG category[R] General function prediction only 
COG ID[COG1512] Beta-propeller domains of methanol dehydrogenase type 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0386021 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.901055 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTGATCG TTATGCGTAT AATCCTTTTT CTACTCACTT TATGGTGCCT TCCTGTGCTT 
GCCCAGCAAA TTGCTGTGCC GGAGCTGCGC CAACAGGTGA CCGATATTAC TGGTACCTTA
AGCACGTCTG AACAACAATC ACTAACACAA CAGCTGCAGG ATATTACACA AAAAACACGG
GCACAGGTCG CTGTATTAAT AGTGCCATCC ACCGGAGACG ATTCTATTGA ACAATATGCT
ACAAGAGTTT TTGACAATTG GCGTTTAGGA GATGCCAAAC GTAATGATGG GATACTGATC
ATTGTTGCCT GGTCGGATCG TACTGTCCGC ATCCAGGTAG GTTATGGGCT GGAAGAAAAG
GTAACCGATG CTCTGGCTGG CAATATCATC CGTAGCATCA TGATACCCGC CTTTAAAAAA
CAAAAATTAG CTAAGGGATT AGAATTAGCT ATAATCGCTT TGAATAACCA ACTCACTTCA
CAACACCAAT ATTCGTCTAA TCCTTCAGAA AGTGAATCAG CGTCTTCCAG TGATCATTAC
TACTTTGCTA TTTTTTGGGT ATTTGCAGTG ATGTTCTTCC CTTTCTGGTT TTTTCATCAA
GGCAATAATT TTTGTCGGGC ATTTAAAAGC AGTGTTTGTA TTTCAACAGT CTATCTTATA
GATTTATTCC TGTTCTCCGA TCAAACTTTT TCCATTGCTG TATTTTCCTT CTTTTTTGCT
TTCACCATCA TTATGGTCTT TACCTGGTTA TGTGTCCCAC AGAAAAAAGC ATCAGGTAGA
AGTTATCATT CAGACAGCGG CGGTTCTGGT GGCGGCTCAA GTGGCGGCGG ATTTAACGGA
GGTGGCGGTT CTTCTGGCGG TGGCGGCGCG TCTGGCCGCT GGTAA
 
Protein sequence
MVIVMRIILF LLTLWCLPVL AQQIAVPELR QQVTDITGTL STSEQQSLTQ QLQDITQKTR 
AQVAVLIVPS TGDDSIEQYA TRVFDNWRLG DAKRNDGILI IVAWSDRTVR IQVGYGLEEK
VTDALAGNII RSIMIPAFKK QKLAKGLELA IIALNNQLTS QHQYSSNPSE SESASSSDHY
YFAIFWVFAV MFFPFWFFHQ GNNFCRAFKS SVCISTVYLI DLFLFSDQTF SIAVFSFFFA
FTIIMVFTWL CVPQKKASGR SYHSDSGGSG GGSSGGGFNG GGGSSGGGGA SGRW