Gene EcSMS35_2714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2714 
Symbol 
ID6143923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2793980 
End bp2794828 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content52% 
IMG OID641617585 
Productputative DNA-binding transcriptional regulator 
Protein accessionYP_001744750 
Protein GI170680195 
COG category[K] Transcription 
COG ID[COG1737] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGCT TACTTCGTAT CCGTCAGCGT TACCAGGGGC TTGCCCAGAG TGATAAAAAA 
CTGGCGGATT ATCTGCTGCT ACAACCTGAT ACGGCGCGCC ATTTAAGCTC TCAGCAACTG
GCCAACGAAG CCGGAGTCAG TCAGTCCAGC GTCGTGAAGT TCGCGCAAAA ACTCGGCTAT
AAAGGTTTTC CGGCACTTAA GTTGGCGTTG AGTGAAGCGC TGGCAAGCCA GCCGGAATCT
CCCTCCGTGC CCATTCATAA CCAAATCCGC GGTGATGATC CGTTACGGCT GGTCGGCGAA
AAACTGATTA AAGAAAATAC TGCCGCCATG TACGCAACGC TAAACGTTAA TAGTGAAGAG
AAACTGCATG AATGCGTAAC AATGTTGCGC TCTGCGCGGC GGATAATTCT GACCGGTATT
GGCGCTTCGG GTCTGGTGGC GCAAAACTTT GCCTGGAAGC TGATGAAGAT TGGCTTCAAT
GCTGCCGCAG TGCGCGATAT GCATGCGCTA CTCGCTACAG TACAGGCGTC GTCCCCTGAC
GATCTGTTAT TAGCCATTTC CTACACCGGT GTACGACGCG AGTTAAACCT GGCGGCAGAT
GAGATGCTGC GAGTGGGCGG AAAAGTGCTG GCGATTACCG GCTTTACTCC CAATGCCCTG
CAACAGCGTG CTTCTCATTG CCTGTATACC ATTGCCGAAG AACAAGCGAC AAACAGTGCT
TCAATCTCTG CTTGTCACGC GCAGGGAATG TTAACGGATT TGCTGTTCAT TGCGCTGATT
CAGCAGGATC TGGAACTGGC ACCAGAACGT ATTCGTCATA GTGAAGCGCT GGTGAAAAAA
CTGGTCTGA
 
Protein sequence
MNGLLRIRQR YQGLAQSDKK LADYLLLQPD TARHLSSQQL ANEAGVSQSS VVKFAQKLGY 
KGFPALKLAL SEALASQPES PSVPIHNQIR GDDPLRLVGE KLIKENTAAM YATLNVNSEE
KLHECVTMLR SARRIILTGI GASGLVAQNF AWKLMKIGFN AAAVRDMHAL LATVQASSPD
DLLLAISYTG VRRELNLAAD EMLRVGGKVL AITGFTPNAL QQRASHCLYT IAEEQATNSA
SISACHAQGM LTDLLFIALI QQDLELAPER IRHSEALVKK LV