Gene EcSMS35_2626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2626 
SymbolgcvR 
ID6146255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2684186 
End bp2684758 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content50% 
IMG OID641617497 
Productglycine cleavage system transcriptional repressor 
Protein accessionYP_001744662 
Protein GI170680018 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2716] Glycine cleavage system regulatory protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACACTGT CATCGCAACA TTATCTGGTG ATCACTGCGT TGGGTGCCGA TCGCCCTGGA 
ATAGTGAACA CCATCACCCG TCATGTCAGT AGTTGCGGCT GTAATATTGA AGACAGTCGC
CTGGCGATGC TGGGAGAAGA GTTCACGTTT ATCATGCTGC TTTCCGGTTC ATGGAATGCC
ATTACTCTGA TTGAATCAAC GTTACCGTTG AAAGGTGCCG AACTGGATCT TTTAATCGTG
ATGAAGCGCA CGACGGCGCG TCCGCGTCCG CCAATGCCAG CATCTGTCTG GGTTCAGGTC
GATGTGGCAG ACTCCCCGCA TTTAATTGAA CGCTTCACAG CACTTTTCGA CGCGCATCAT
ATGAACATTG CGGAGCTGGT GTCGCGCACG CAACCTGCTG AAAATGAACG GGCTGCGCAG
TTGCATATTC AGATAACTGC CCACAGCCCC GCATCTGCGG ACGCAGCAAA TATTGAGCAA
GCGTTCAAAG CCCTATGTAC AGAACTCAAT GCACAAGGCA GTATTAACGT CGTCAATTAT
TCCCAACATG ATGAACAGGA TGGAGTTAAG TAA
 
Protein sequence
MTLSSQHYLV ITALGADRPG IVNTITRHVS SCGCNIEDSR LAMLGEEFTF IMLLSGSWNA 
ITLIESTLPL KGAELDLLIV MKRTTARPRP PMPASVWVQV DVADSPHLIE RFTALFDAHH
MNIAELVSRT QPAENERAAQ LHIQITAHSP ASADAANIEQ AFKALCTELN AQGSINVVNY
SQHDEQDGVK