| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2512 |
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| Symbol | |
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| ID | 6144269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2565160 |
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| End bp | 2565789 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 641617384 |
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| Product | type 1 fimbriae regulatory protein |
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| Protein accession | YP_001744555 |
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| Protein GI | 170684056 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.570306 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAACA GAAAATTTTT AACGCATCAT GAAATTAATT TACTACTTCA ATCTGTAAGA
CAAAAGAGTT GCTCTTCACG CGATGTTTGC ATGATTTTAT TGGCTTATTT TCATGGTCTG
CGTGTTAGTG AGCTCTTATC TCTGCAGTTG TCGGATTTAG AACTAACTAC AGAAAAAATA
TATATTCAAC GGATAAAAAA TGGATTCAGT ACAGTCCATC CACTTCAAAA GGAAGAGGTG
ATTGCAATAA CAAACTGGCT GAATGAAAGG AATTCATTAA ATGTTAAACA TTTCAATGAT
AACCCGTGGT TATTTGTTTC CCGAACAGGA AAACCATTAT CGAGACAACG ATTTTATAAC
ATAGTTTCTG CTGCGGGTAA AAATGCAGGT TTAAATATTA AAGTTCATCC ACATATGTTA
CGCCATGCAT GTGGTTATTC ACTAGCAGAT AATGGTGTGG ATACCCGTCT TATTCAGGAC
TATCTCGGGC ATCGTAATAT CAGGCATACG GTAATTTATA CTGCTTCTAA TTCAATGAGA
TTTGAAAAAA TGTGGGGGAG AGGTGACGCA AAAAAGCAAC ATTTTGACCC AAAATGTAAA
CCCAATCTTT GTTTAGAAAT TCTCGTATAG
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| Protein sequence | MQNRKFLTHH EINLLLQSVR QKSCSSRDVC MILLAYFHGL RVSELLSLQL SDLELTTEKI
YIQRIKNGFS TVHPLQKEEV IAITNWLNER NSLNVKHFND NPWLFVSRTG KPLSRQRFYN
IVSAAGKNAG LNIKVHPHML RHACGYSLAD NGVDTRLIQD YLGHRNIRHT VIYTASNSMR
FEKMWGRGDA KKQHFDPKCK PNLCLEILV
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