| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2496 |
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| Symbol | |
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| ID | 6144254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2541162 |
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| End bp | 2543810 |
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| Gene Length | 2649 bp |
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| Protein Length | 882 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641617368 |
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| Product | fimbrial usher protein |
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| Protein accession | YP_001744540 |
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| Protein GI | 170679648 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.111704 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTAATC ACTCAAATTT TCGGCTGCGG GGAATCGCCT GCTATATTGC GCTGGCAATC
TCAGGTGGAT CAGTCAATGC ATGGGCTGAT GATTCCATTC AATTTGACCC CCGTTTCCTT
GAGTTAAAGG GCGACACGAA AATTGATCTC GGTAAGTTTT CAAAAAAAGG GTATGTCGAC
GCGGGAAAAT ATAATTTACG TGTATTTATA AATAAACAAC CCCTTTCTGA TGAATACGAC
ATTAACTGGT ATGTTTCTGA AAACGATCCA ACAAAAACGT ATGCCTGCCT GACACCTGAG
TTAGTGGCGG CGCTGGGGCT GAAAGAAGGG ATAGCAAAAA GCCTGCAGTG GACGCACAAC
GATGAATGCC TTAAACCGGG GCAATTAGAT GGGATGGAAG TCGAGAATGA TTTAAGCCAG
TCGGCGTTGC TGCTGACAGT GCCACAGGCT TATCTCGAAT ATACCAGCAG CGACTGGGAC
CCACCCTCAC GCTGGGACGA CGGTATTCCT GGCCTGATTG CCGACTACAG CCTCAATGCG
CAAACCCGCC ACCAGGAGCA GGGTGGCGAG GACTCACATG ATATCAGCGG CAACGGTACC
GTTGGGGCGA ACCTGGGGGC ATGGCGTTTC CGCGCAGACT GGCAAAGTGA TTATCAGCAC
ACCCGCAGCA ACGATGACGA CGATGACAGC AGTAACAGTA CAACGAGCAA AAACTGGGAC
TGGAGCCGTT ATTACGCCTG GCGGGCCTTA CCCTCTTTAA AAGCGAAGCT GTCGCTGGGG
GAAGATTATC TCAATTCCGA TATTTTCGAC GGCTTTAACT ATATTGGCAG CAGCGTCAGC
ACCGATGACC AGATGCTGCC GCCCAACCTG CGCGGCTATG CGCCGGATGT CTCCGGCGTG
GCGCACAGCA GTGCAAAAGT CACCATTAGC CAGATGGGCC GGGTACTTTA CGAAACCCAG
GTTCCCGCCG GGCCATTCCG CATTCAGGAT ATCGGCGACT CCGTCTCCGG CACACTGCAC
GTCCGCGTTG AAGAACAGAA TGGTCAGGTG CAGGAATATG ACGTTACGAC CGCATCTATG
CCATTCCTCA CGCGCCAGGG GCAGGTGCGT TACAAAGTGA TGATGGGGCG TCCGGAAGAC
TGGAACCACA AGACCGAAGG CGGCTTTTTC TCCGGCGGAG AAGCGTCATG GGGGGTGGCA
GATGGCTGGT CGCTCTACGG TGGCGCGCTG GCAGATGAAC ACTACCAGTC GGCGGCGATG
GGGGTGGGGC GCGACCTCGC ACAGTTTGGC GCGCTGGCGT TCGATGTGAC TCACTCGCAC
GTCAACCTGG ATCATGACAG CGCATACGGC AAAGGAAAAC TGGACGGCAA CTCCTTTCGC
GTGAGCTATG CCAAAGACTT TGACGAACTC AACAGCCGCG TCACCTTTGC AGGCTACCGT
TTTTCTGAAA AGAACTTCAT GACCATGAGC GAGTATCTGG ACGCGAACCA GTCGGACATG
GCGCGGACCG GTAACGACAA AGAGATGTAT ACGATCACCT ATAACCAGAA CTTTGCCGCT
GCGGGTGTCT CGATCTATCT CAACTACTCC CATCGTACTT ACTGGGATCG CCCGGAACAG
ACAAACTATA ACCTGATGTT TTCCCACTAT TTTAATATGG GGAGCATTCG CAACGTGAGC
ATCTCGGTGA CCGGCTATCG CTACGAATAT GACGATAACG CGGATAAGGG GATGTACCTC
AGCATGAGCA TTCCGTGGAG CGACAGCAGC ACCGTGACCT ACAACGGTTC CTACGGCAGC
GGGTCGGACA GCAGCCAGGT CGGTTACTTT AAGCGCGTTG ATGACGCAAC GCACTACCAG
GTTAACGTCG GTACCAGCGA ACAGCACGGC AGCGTGGATG GTTATCTGAG TCACGACGGC
TCGCTGGCGA AGGTTGATCT CAGCGCCAAC TACCATGAGG GGGAATACCG CTCGGCGGGG
ATCGCCTTAC AGGGCGGGGC AACGCTGACC GCGCATGGTG GGGCGCTGCA TCGCACTCAA
AGCATGGGCG GTACGCGCCT GCTGATTGAC GCCGACGGGA TTGCCAATGT GCCGGTCGAA
AGCAACGGCG CGCCGGTGTA CACCAATATG TTTGGCAAGG CGGTGGTCGC CGATATTAAC
AACTACTATC GCAATCAGGC GTATATCGAT TTAAACAACC TGCCAGAAGA TGCGGAAGCC
ACCCAGTCGG TGGTACAGGC AACCCTGACG GAAGGTGCAA TTGGCTATCG CAAATTCAAA
GTGATCAGCG GGCAAAAAGC GATGGCGGTA CTGCGGTTGC GTGACGGCAG CTACCCGCCG
TTTGGCGCGG AAGTGAAAAA CGACGAGCAG CAGCAGGTTG GCATTGTGGA TGATGAAGGC
AATGTCTATC TGGCGGGAGT CAATGCGGGT GAGCATATGA CGGTGTTCTG GGAAGGCAGC
GCACAATGCG AGATCGTATT GCCGAAGCCG CTACCTGCCG ATCTGTTCAG CGGCCTGTTG
TTGCCGTGTG AACAAAAGGG AACGGCAGCC CCTGATTCTT CAGCGCCAGA AATTAAGCCT
GTTATTCAGG ACCAGACGCG GCAAGTCACA CCAACGGAAG CGCCGACGTC AATTTCAGCT
ACTCAATAA
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| Protein sequence | MPNHSNFRLR GIACYIALAI SGGSVNAWAD DSIQFDPRFL ELKGDTKIDL GKFSKKGYVD
AGKYNLRVFI NKQPLSDEYD INWYVSENDP TKTYACLTPE LVAALGLKEG IAKSLQWTHN
DECLKPGQLD GMEVENDLSQ SALLLTVPQA YLEYTSSDWD PPSRWDDGIP GLIADYSLNA
QTRHQEQGGE DSHDISGNGT VGANLGAWRF RADWQSDYQH TRSNDDDDDS SNSTTSKNWD
WSRYYAWRAL PSLKAKLSLG EDYLNSDIFD GFNYIGSSVS TDDQMLPPNL RGYAPDVSGV
AHSSAKVTIS QMGRVLYETQ VPAGPFRIQD IGDSVSGTLH VRVEEQNGQV QEYDVTTASM
PFLTRQGQVR YKVMMGRPED WNHKTEGGFF SGGEASWGVA DGWSLYGGAL ADEHYQSAAM
GVGRDLAQFG ALAFDVTHSH VNLDHDSAYG KGKLDGNSFR VSYAKDFDEL NSRVTFAGYR
FSEKNFMTMS EYLDANQSDM ARTGNDKEMY TITYNQNFAA AGVSIYLNYS HRTYWDRPEQ
TNYNLMFSHY FNMGSIRNVS ISVTGYRYEY DDNADKGMYL SMSIPWSDSS TVTYNGSYGS
GSDSSQVGYF KRVDDATHYQ VNVGTSEQHG SVDGYLSHDG SLAKVDLSAN YHEGEYRSAG
IALQGGATLT AHGGALHRTQ SMGGTRLLID ADGIANVPVE SNGAPVYTNM FGKAVVADIN
NYYRNQAYID LNNLPEDAEA TQSVVQATLT EGAIGYRKFK VISGQKAMAV LRLRDGSYPP
FGAEVKNDEQ QQVGIVDDEG NVYLAGVNAG EHMTVFWEGS AQCEIVLPKP LPADLFSGLL
LPCEQKGTAA PDSSAPEIKP VIQDQTRQVT PTEAPTSISA TQ
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