Gene EcSMS35_2484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2484 
Symbol 
ID6145217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2531518 
End bp2532327 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content53% 
IMG OID641617356 
Producthypothetical protein 
Protein accessionYP_001744528 
Protein GI170681877 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACGT TTAATAGCCT GTTTATGGTT TCCCCGCTGT TGCTGGGAGT TCTCTTTTTT 
GTCGCCATGC TGGCGGGATT TATCGACTCG ATTGCCGGTG GCGGTGGGTT ACTCACCATT
CCGGCATTGA TGGCGGCGGG GATGTCTCCG GCTAACGCGC TGGCAACTAA TAAACTGCAA
GCCTGCGGCG GCTCTATTTC CGCCACTATC TACTTTATTC GGCGCAAAGT GGTTAGCTTA
AGCGATCAGA AACTCAATAT CGCCATGACC TTTGTCGGCT CAATGAGCGG CGCGCTGTTG
GTGCAGTATG TTCAGGCCGA TGTCTTACGG CAGATTTTAC CGATCCTGGT GATTTGTATC
GGCCTCTATT TTTTGCTGAT GCCAAAACTG GGAGAAGAAG ATCGCCAGCG CCGGATGTAT
GGACTGCCAT TTGCGCTGGT GGCGGGGGGC TGCGTCGGTT TTTACGATGG ATTCTTTGGC
CCGGCTGCTG GGTCGTTTTA CGCGCTGGCC TTTGTTACGC TGTGCGGATT CAACCTCGCC
AAAGCCACGG CCCACGCCAA ATTACTCAAC GCAACGTCAA ACATCGGTGG TTTGCTGCTG
TTTATTCTCG GCGGCAAAGT GATTTGGGCG ACAGGATTTG TGATGTTGGT AGGACAGTTC
CTCGGCGCGC GCATGGGGTC AAGACTGGTG TTGAGCAAAG GACAAAAGCT GATCCGCCCG
ATGATCGTTA TCGTCTCGGC GGTGATGAGT GCCAAATTAC TTTACGATAG CCACGGACAG
GAGATCCTCC ACTGGTTGGG GATGAACTAA
 
Protein sequence
METFNSLFMV SPLLLGVLFF VAMLAGFIDS IAGGGGLLTI PALMAAGMSP ANALATNKLQ 
ACGGSISATI YFIRRKVVSL SDQKLNIAMT FVGSMSGALL VQYVQADVLR QILPILVICI
GLYFLLMPKL GEEDRQRRMY GLPFALVAGG CVGFYDGFFG PAAGSFYALA FVTLCGFNLA
KATAHAKLLN ATSNIGGLLL FILGGKVIWA TGFVMLVGQF LGARMGSRLV LSKGQKLIRP
MIVIVSAVMS AKLLYDSHGQ EILHWLGMN