Gene EcSMS35_2448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2448 
SymbolyfbT 
ID6144433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2498314 
End bp2498964 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content57% 
IMG OID641617320 
Productputative phosphatase 
Protein accessionYP_001744492 
Protein GI170680905 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.745831 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGTGCA AAGGTTTTCT GTTTGATCTT GATGGAACGC TGGTGGATTC CCTGCCTGCG 
GTAGAGCGGG CGTGGAGCAA CTGGGCCAGA CGTCATGGGT TAGCGCCGGA AGAGGTGCTG
GCTTTCATTC ACGGTAAACA GGCGATCACC TCTCTGCGCC ATTTTATGGC GGGCAAATCC
GAGGCTGATA TTGCCGCCGA GTTTACGCGT CTGGAGCAAA TCGAGGCCAC GGAAACCGAG
GGTATTACCG CGCTTCCGGG GGCAATCGCC TTACTCAATC ATTTGAATAA AGCAGGTATT
CCGTGGGCCA TTGTGACTTC TGGCTCCATG CCGGTAGCGC GAGCGCGCCA TAAAGTAGCT
GGGCTTCCCG CACCAGAGGT GTTTGTAACC GCTGAGCGAG TGAAGCGCGG AAAACCAGAA
CCTGATGCGT ATCTGTTAGG CGCGCAGCTG CTGGGGCTTG CGCCGCAGGA GTGTGTGGTG
GTGGAAGATG CTCCCGCTGG CGTGCTTTCT GGCCTGGCGG CGGGGTGTCA TGTCATTGCG
GTTAACGCTC CGGCAGATAC CCCGCGCCTG AATGAGGTCG ATTTAGTCCT CCACAGTCTG
GAGCAAATTA CTGTGACCAA ACAGCCAAAT GGCGATGTTA TTATTCAGTG A
 
Protein sequence
MRCKGFLFDL DGTLVDSLPA VERAWSNWAR RHGLAPEEVL AFIHGKQAIT SLRHFMAGKS 
EADIAAEFTR LEQIEATETE GITALPGAIA LLNHLNKAGI PWAIVTSGSM PVARARHKVA
GLPAPEVFVT AERVKRGKPE PDAYLLGAQL LGLAPQECVV VEDAPAGVLS GLAAGCHVIA
VNAPADTPRL NEVDLVLHSL EQITVTKQPN GDVIIQ