| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2298 |
|---|
| Symbol | galS |
|---|
| ID | 6144481 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 2326342 |
|---|
| End bp | 2327382 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641617172 |
|---|
| Product | DNA-binding transcriptional regulator GalS |
|---|
| Protein accession | YP_001744345 |
|---|
| Protein GI | 170679819 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.00335365 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATCACCA TTCGTGATGT AGCGCGTCAG GCTGGCGTCT CTGTGGCAAC GGTTTCCCGA
GTGCTCAATA ACAGCACGCT GGTCAGTGCC GACACGCGTG AAGCAGTAAT GAAAGCCGTG
AGTGAGCTGG ATTATCGACC AAATGCCAAT GCCCAGGCGC TGGCAACTCA GGTTAGCGAC
ACCATTGGCG TGGTGGTGAT GGACGTTTCT GATGCGTTTT TCGGCGCGCT GGTAAAAGCG
GTGGATTTGG TCGCCCAGCA GCATCAGAAA TACGTGCTAA TCGGCAATAG CTATCATGAA
GCGGAAAAAG AGCGTCACGC CATTGAGGTG TTAATTCGCC AGCGTTGTAA TGCGTTGATT
GTTCACTCAA AAGCATTGAG TGATGATGAA CTGGCACAAT TTATGGATAA CATTCCCGGT
ATGGTGTTAA TCAACCGCGT TGTGCCGGGG TACGCCCATC GTTGCGTTTG CCTGGATAAT
CTCAGCGGTG CCCGAATGGC GACGCGCATG TTGCTGAATA ACGGTCATCA ACGTATTGGT
TATCTTTCTT CCAGCCACGG CATTGAAGAT GACGCCATGC GTAAAGCAGG CTGGATGAGT
GCGTTGAAAG AGCAGGATAT TATTCCGCCG GAAAGCTGGA TTGGCACTGG CACGCCGGAC
ATGCCGGGCG GTGAGGCGGC GATGGTTGAA CTGCTGGGGC GCAATCTACA ACTTACCGCT
GTATTTGCTT ATAACGACAA TATGGCTGCT GGCGCACTGA CAGCATTAAA AGATAATGGC
ATTGCGATTC CGTTACATCT CTCAATCATC GGTTTCGATG ATATTCCCAT CGCCCGTTAC
ACCGACCCGC AATTAACGAC CGTGCGTTAT CCCATTGCTT CAATGGCTAA ATTAGCCACC
GAACTGGCCT TGCAGGGGGC AGCAGGCAAT ATTGATCCTC GTGCCAGCCA CTGTTTTATG
CCAACGTTAG TGCGTCGTCA TTCTGTCGCA ACGCGCCAGA ATGCGGCGGC GATCACTAAC
TCAACAAATC AGGCGATGTA A
|
|---|
| Protein sequence | MITIRDVARQ AGVSVATVSR VLNNSTLVSA DTREAVMKAV SELDYRPNAN AQALATQVSD
TIGVVVMDVS DAFFGALVKA VDLVAQQHQK YVLIGNSYHE AEKERHAIEV LIRQRCNALI
VHSKALSDDE LAQFMDNIPG MVLINRVVPG YAHRCVCLDN LSGARMATRM LLNNGHQRIG
YLSSSHGIED DAMRKAGWMS ALKEQDIIPP ESWIGTGTPD MPGGEAAMVE LLGRNLQLTA
VFAYNDNMAA GALTALKDNG IAIPLHLSII GFDDIPIARY TDPQLTTVRY PIASMAKLAT
ELALQGAAGN IDPRASHCFM PTLVRRHSVA TRQNAAAITN STNQAM
|
|---|
| |