| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2294 |
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| Symbol | |
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| ID | 6143286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 2321151 |
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| End bp | 2322386 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641617168 |
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| Product | dihydropyrimidine dehydrogenase |
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| Protein accession | YP_001744341 |
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| Protein GI | 170682869 |
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| COG category | [C] Energy production and conversion
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0167] Dihydroorotate dehydrogenase
[COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
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| TIGRFAM ID | [TIGR01037] dihydroorotate dehydrogenase (subfamily 1) family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.00484206 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTAACGA AAGATCTTTC GATTACTTTT TGCGGCGTGA AGTTTCCCAA CCCGTTCTGC
CTCTCTTCTT CGCCGGTAGG CAACTGCTAT GAGATGTGTG CCAAAGCCTA CGACACTGGC
TGGGGCGGCG TGGTGTTTAA AACGATCGGC TTTTTTATCG CCAACGAAGT CTCGCCGCGT
TTTGATCATC TGGTGAAAGA AGATACCGGT TTTATCGGCT TCAAAAATAT GGAGCAGATT
GCTGAACATC CGTTGGAAGA GAATCTGGCC GCCCTGCGTC GGCTGAAAGA AGATTACCCG
GACAAAGTAT TGATCGCTTC AATCATGGGC GAAAATGAGC AGCAATGGGA AGAGCTGGCG
CGTCTGGTGC AAGAAGCTGG CGCGGATATG ATCGAGTGTA ACTTCTCCTG TCCGCAAATG
ACTTCTCATG CGATGGGTAG CGATGTCGGG CAAAGCCCGG AGCTGGTAGA AAAATATTGT
CGGGCAGTAA AACGTGGTTC CACGCTGCCA ATGCTGGCGA AGATGACGCC GAATATCGGT
GATATGTGCG AAGTGGCGCT GGCGGCGAAG CGCGGCGGCG CAGATGGCAT TGCGGCGATT
AACACCGTTA AATCCATCAC CAATATCGAT CTTAATCAGA AAATCGGTAT GCCGATCGTT
AACGGTAAAT CGAGTATTTC CGGATATTCC GGTAAAGCGG TAAAACCGAT CGCCCTGCGC
TTCATTCAGC AAATGCGTAC CCATCCAGAG CTGCGCGATT TCCCGATCAG CGGTATCGGC
GGTATTGAAA CCTGGGAAGA TGCGGCGGAG TTTTTATTGC TCGGTGCAGC GACGTTGCAG
GTGACCACCG GCATTATGCA GTACGGGTAT CGGATAGTGG AAGATATGGC GAGCGGGTTG
TCGCATTATC TCACCGATCA GGGATTTGAT TCGTTGCAGG AGATGGTAGG TCTGGCGAAT
AACAATATTG TCCCGGCGGA AGATTTAGAC CGCAGTTATA TTGTCTATCC CCATATCAAT
CTCGATAAAT GTGTTGGCTG TGGACGCTGT TATATTTCCT GTTACGACGG CGGTCACCAG
GCGATGGAAT GGAGCGAGAA AACCCGTACA CCGCATTGTA ATACCGAGAA ATGCGTGGGT
TGTCTGCTTT GTGGTCACGT CTGCCCGGTG GGTTGTATTG ATCTCGGAGA AGTGAAGTTT
AAGAAAGGCG AGAAAGAACA CCCGGTAACG TTGTAG
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| Protein sequence | MLTKDLSITF CGVKFPNPFC LSSSPVGNCY EMCAKAYDTG WGGVVFKTIG FFIANEVSPR
FDHLVKEDTG FIGFKNMEQI AEHPLEENLA ALRRLKEDYP DKVLIASIMG ENEQQWEELA
RLVQEAGADM IECNFSCPQM TSHAMGSDVG QSPELVEKYC RAVKRGSTLP MLAKMTPNIG
DMCEVALAAK RGGADGIAAI NTVKSITNID LNQKIGMPIV NGKSSISGYS GKAVKPIALR
FIQQMRTHPE LRDFPISGIG GIETWEDAAE FLLLGAATLQ VTTGIMQYGY RIVEDMASGL
SHYLTDQGFD SLQEMVGLAN NNIVPAEDLD RSYIVYPHIN LDKCVGCGRC YISCYDGGHQ
AMEWSEKTRT PHCNTEKCVG CLLCGHVCPV GCIDLGEVKF KKGEKEHPVT L
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