| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2249 |
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| Symbol | flu1 |
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| ID | 6143968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2267288 |
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| End bp | 2270134 |
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| Gene Length | 2847 bp |
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| Protein Length | 948 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641617125 |
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| Product | antigen 43 |
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| Protein accession | YP_001744298 |
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| Protein GI | 170680707 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3468] Type V secretory pathway, adhesin AidA |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGAC ATCTGAACAC CAGCTACAGG CTGGTATGGA ATCACATTAC GGGCACCCTG
GTGGTGGCTT CCGAACTGGC CCGCTCACGG GGAAAACGCG CCGGTGTGGC GGTTGCGCTG
TCTCTTGCTG CTGTCACGCC AGTCCCGGCA CTGGCTGCTG ACACGGTTGT AGAGGCGGGA
GAAACCGTGA ACGGCGGAAC ACTGACAAAT CATGACAACC AGATTGTCTT CGGTACGACC
AACGGAATGA CCATCAGTAC CGGGCTGGAG TATGGGACGG ATAACGAGGC CAATACCGGC
GGGCAATGGG TACAGGATGG CGGCACAGCC AGTAATACCA CCATCAGCAG CGGCGGGCTC
CAGTTTGTAG GTGCCGGGGG AAAGGCTACA GACACAATAA TCAATGAAGG AGGCGGACAA
AGCCTGAAGG GACTGGCACT GAACACCACG CTGAATGGTG GCGAGCAGTG GATGCATGAA
GGTGCGATAG CCACAGGAAC CGTCATTAAT GATAAGGGCT GGCAGGTCGT CAAACCCGGC
GCAGTGGCAA CAGACACCGT TGTGAATACC GGCGCAGAAG GAGGACCGGA TGCAGAAAAT
GGTGATACCG GGCAGTTTGT TCGCGGAAAT GCCGTACGTA CCACCATCAA TAAAAATGGT
CGTCAGATTG TGACTGTTGA AGGAACAGCA AATACCACTG TGGTTTATGC CGGCGGCGAC
CAGACGGTAC ATGGCCACGC ACTGGATACC ACGCTGAATG GCGGTAACCA GTATGTACAC
AACGGCGGTA CAACGTCTGA CACTGTTGTG AACAGTGACG GCTGGCAGAT TATCAAGGAA
GGTGGTCTGG CGGATTTCAC CACCGTTAAC CAGAAAGGCA AACTGCAGGT GAACGCCGGT
GGTACAGCCA CGAATGTCAC CCTGAAGCAG GGAGGCGCAC TGGTCACCAG TACGGCGGCA
ACCGTCACCG GCAGCAACCG TCTGGGCAAT TTCGCGGTGG AAAACGGTAA GGCTGACGGT
GTTGTTCTGG AGTCCGGCGG TCGTCTGGAT GTACTGGAGG GTCATTCAGC GCAGAAAACA
CGGGTGGATG ACGGCGGTAC CCTGGCAGTG TCTGCCGGTG GTAAGGCGAC AGGTGTCACC
ATGACATCCG GTGGTGCCCT GATTGCAGAC AGTGGTGCCA CTGTTGAGGG GACCAATGCC
AGCGGTAAGT TCAGTATTGA TGGCATATCC GGTCAGGCCA GCGGCCTGCT GCTGGAAAAT
GGCGGCAGCT TTACGGTTAA TGCCGGGGGA CAGGCTGGCA ACACCACTGT CGGACATCGT
GGAACACTGA CGCTGGCTGC CGGGGGAAGT CTGAGTGGCA GAACACAGCT CAGTAAAGGC
GCCAGCATGG TACTGAATGG TGATGTGGTC AGTACCGGCG ATATTGTTAA CGCAGGGGAG
ATTCGCTTTG ATAATCAGAC GACACAGGAT GCCGTCCTGA GCCGTGCTGT TGCAAAAGGC
GACGCCCCGG TAACGTTCCA TAAACTGACC ACCAGTAACC TCACCGGTCA GGGTGGCACC
ATCAATATGC GTGTTCGCCT TGATGGCAGC AATGCCTCTG ACCAGCTGGT GATTAATGGT
GGTCAGGCAA CCGGCAAAAC CTGGCTTGCG TTCACAAATG TCGGAAACAG TAACCTCGGG
GTGGCAACTT CCGGACAGGG TATCCGGGTT GTGGATGCAC AGAATGGTGC CACCACAGAA
GAAGGTGCGT TTGCCCTGAG TCGCCCGCTT CAGGCCGGTG CCTTTAACTA CACCCTGAAC
CGTGACAGCG ATGAAGACTG GTACCTGCGC AGTGAAAATG CTTATCGTGC TGAAGTCCCC
CTGTATGCCT CCATGCTGAC ACAGGCAATG GACTATGACC GGATTCTGGC AGGCTCCCGC
AGCCATCAGA CCGGTGTAAA CGGTGAAAAT AACAGCGTCC GTCTCAGCAT TCAGGGCGGT
CATCTCGGTC ACGATAACAA CGGCGGTATT GCCCGTGGGG CCACGCCGGA AAGCAGCGGC
AGCTATGGCT TCGTCCGTCT GGAGAGTGAC CTGCTGAGAA CAGAGGTTGC CGGTATGTCT
GTGACCGCGG GGGTATATAG TGCTGCTGGC CATTCTTCCG TTGATGTTAA GGATGATGAC
GGCTCCCGCG CCGGCACGGT CCGGGATGAT GCCGGCAGCC TGGGCGGATA CCTGAATCTG
GTACACACGT CCTCCGGCCT GTGGGCTGAC ATTATGGCAC AGGGAACCCG CCACAGCATG
AAAGCGTCAT CGGACAATAA CGACTTCCGC GCCCGGGGCT GGGGCTGGCT GGGCTCACTG
GAAACCGGTC TGCCCTTCAG TATCACTGAC AACCTGATGC TGGAACCACA ACTGCAGTAC
ACCTGGCAGG GACTTTCCCT GGATGACGGC CAGGATAACG CCGGTTATGT GAAGTTCGGG
CATGGCAGTG CACAACATAT GCGTGCCGGC TTCCGTCTGG GCAGCCACAA CGATATGAGC
TTTGGTGAAG GCACCTCATC CCGTGACACC CTGCGCGACA GTGCAAAACA CCGTGTGCGT
GAACTGCCGG TGAACTGGTG GGTACAGCCT TCTGTTATCC GCACCTTCAG TTCCCGGGGT
GACATGAGCA TGGGGACAGC CGCCGCCGGC AGTAACATGA CGTTCTCACC GTCCCAGAAT
GGCACGTCAC TGGACCTGCA GGCCGGACTG GAAGCCCGTG TCCGGGAAAA TATCACCCTG
GGCGTTCAGG CCGGTTATGC CCACAGCGTC AGCGGCAGCA GCGCCGAAGG CTATAACGGT
CAGGCCACGC TGAATGTGAC TTTCTGA
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| Protein sequence | MKRHLNTSYR LVWNHITGTL VVASELARSR GKRAGVAVAL SLAAVTPVPA LAADTVVEAG
ETVNGGTLTN HDNQIVFGTT NGMTISTGLE YGTDNEANTG GQWVQDGGTA SNTTISSGGL
QFVGAGGKAT DTIINEGGGQ SLKGLALNTT LNGGEQWMHE GAIATGTVIN DKGWQVVKPG
AVATDTVVNT GAEGGPDAEN GDTGQFVRGN AVRTTINKNG RQIVTVEGTA NTTVVYAGGD
QTVHGHALDT TLNGGNQYVH NGGTTSDTVV NSDGWQIIKE GGLADFTTVN QKGKLQVNAG
GTATNVTLKQ GGALVTSTAA TVTGSNRLGN FAVENGKADG VVLESGGRLD VLEGHSAQKT
RVDDGGTLAV SAGGKATGVT MTSGGALIAD SGATVEGTNA SGKFSIDGIS GQASGLLLEN
GGSFTVNAGG QAGNTTVGHR GTLTLAAGGS LSGRTQLSKG ASMVLNGDVV STGDIVNAGE
IRFDNQTTQD AVLSRAVAKG DAPVTFHKLT TSNLTGQGGT INMRVRLDGS NASDQLVING
GQATGKTWLA FTNVGNSNLG VATSGQGIRV VDAQNGATTE EGAFALSRPL QAGAFNYTLN
RDSDEDWYLR SENAYRAEVP LYASMLTQAM DYDRILAGSR SHQTGVNGEN NSVRLSIQGG
HLGHDNNGGI ARGATPESSG SYGFVRLESD LLRTEVAGMS VTAGVYSAAG HSSVDVKDDD
GSRAGTVRDD AGSLGGYLNL VHTSSGLWAD IMAQGTRHSM KASSDNNDFR ARGWGWLGSL
ETGLPFSITD NLMLEPQLQY TWQGLSLDDG QDNAGYVKFG HGSAQHMRAG FRLGSHNDMS
FGEGTSSRDT LRDSAKHRVR ELPVNWWVQP SVIRTFSSRG DMSMGTAAAG SNMTFSPSQN
GTSLDLQAGL EARVRENITL GVQAGYAHSV SGSSAEGYNG QATLNVTF
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