| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2228 |
|---|
| Symbol | |
|---|
| ID | 6147231 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 2247888 |
|---|
| End bp | 2249231 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641617104 |
|---|
| Product | recombination factor protein RarA |
|---|
| Protein accession | YP_001744278 |
|---|
| Protein GI | 170682500 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.331515 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCAATC TGTCGCTCGA TTTTTCGGAT AATACTTTTC AACCTCTGGC CGCGCGTATG
CGGCCAGAAA ATTTAGCACA GTATATCGGC CAGCAACATT TGCTGGCTGC GGGGAAGCCG
TTGCCGCGCG CTATCGAAGC CGGGCATTTG CATTCTATGA TCCTCTGGGG GCCGCCGGGT
ACCGGCAAAA CAACCCTCGC TGAAGTGATT GCCCGCTATG CGAACGCTGA TGTGGAACGT
ATTTCTGCCG TCACCTCTGG TGTGAAAGAG ATTCGCGAGG CGATCGAGCG CGCTCGGCAA
AACCGCAATG CAGGTCGCCG CACTATTCTT TTTGTTGACG AAGTTCACCG TTTCAACAAA
AGCCAGCAGG ATGCATTTCT GCCACATATT GAAGACGGCA CCATCACTTT TATTGGCGCA
ACCACTGAAA ACCCGTCGTT TGAGCTTAAT TCGGCACTGC TTTCCCGTGC CCGTGTCTAT
CTGTTGAAAT CCCTGAGTAC AGAGGATATT GAGCAAGTAC TGACTCAGGC GATGGAAGAC
AAAACCCGTG GCTATGGTGG TCAGGATATT GTTCTGCCAG ATGAAACACG ACGCGCCATT
GCTGAACTGG TGAATGGCGA CGCGCGCCGG GCGTTAAATA CGCTGGAAAT GATGGCGGAT
ATGGCCGAAG TCGATGATAG CGGTAAGCGG GTCCTGAAAC CTGAATTACT GACCGAAATC
GCCGGTGAAC GTAGCGCCCG CTTTGATAAC AAAGGCGATC GCTTTTACGA TCTGATTTCC
GCATTGCATA AGTCGGTACG TGGTAGCGCA CCCGATGCGG CGCTGTACTG GTATGCGCGA
ATTATTACCG CCGGTGGCGA TCCGTTATAT GTTGCGCGTC GTTGCCTGGC AATTGCTTCC
GAAGATGTCG GCAATGCCGA CCCACGGGCG ATGCAGGTGG CAATTGCGGC CTGGGATTGC
TTTACTCGCG TTGGCCCGGC GGAAGGTGAA CGCGCCATTG CTCAGGCGAT TGTTTACCTG
GCCTGCGCGC CAAAAAGCAA CGCTGTCTAC ACCGCGTTTA AAGCCGCGCT GGCCGATGCT
CGCGAACGTC CCGATTATGA CGTGCCGGTT CATTTGCGTA ATGCGCCGAC GAAATTAATG
AAGGAAATGG GCTACGGGCA GGAATATCGT TACGCTCATG ATGAAGCAAA CGCTTATGCT
GCCGGTGAGG TTTATTTCCC GCCGGAAATA GCACAAACAC GCTATTATTT CCCGACAAAC
AGGGGCCTTG AAGGCAAGAT TGGCGAAAAG CTCGCCTGGC TGGCTGAACA GGATCAAAAT
AGCCCCATAA AACGCTACCG TTAA
|
|---|
| Protein sequence | MSNLSLDFSD NTFQPLAARM RPENLAQYIG QQHLLAAGKP LPRAIEAGHL HSMILWGPPG
TGKTTLAEVI ARYANADVER ISAVTSGVKE IREAIERARQ NRNAGRRTIL FVDEVHRFNK
SQQDAFLPHI EDGTITFIGA TTENPSFELN SALLSRARVY LLKSLSTEDI EQVLTQAMED
KTRGYGGQDI VLPDETRRAI AELVNGDARR ALNTLEMMAD MAEVDDSGKR VLKPELLTEI
AGERSARFDN KGDRFYDLIS ALHKSVRGSA PDAALYWYAR IITAGGDPLY VARRCLAIAS
EDVGNADPRA MQVAIAAWDC FTRVGPAEGE RAIAQAIVYL ACAPKSNAVY TAFKAALADA
RERPDYDVPV HLRNAPTKLM KEMGYGQEYR YAHDEANAYA AGEVYFPPEI AQTRYYFPTN
RGLEGKIGEK LAWLAEQDQN SPIKRYR
|
|---|
| |