Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2205 |
Symbol | lpxK |
ID | 6144902 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 2217905 |
End bp | 2218891 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641617081 |
Product | tetraacyldisaccharide 4'-kinase |
Protein accession | YP_001744255 |
Protein GI | 170683237 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1663] Tetraacyldisaccharide-1-P 4'-kinase |
TIGRFAM ID | [TIGR00682] tetraacyldisaccharide 4'-kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0766314 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 0.274166 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGAAA AAATCTGGTC TGGTGAATCC CCTTTGTGGC GGCTATTGCT GCCACTCTCC TGGTTGTATG GCCTGGTGAG TGGCGCGATC CGTCTTTGCT ATAAACTAAA ACTGAAGCGC GCCTGGCGTG CCCCCGTACC GGTTGTCGTG GTTGGTAATC TCACCGCAGG CGGCAACGGA AAAACCCCGG TCGTTGTCTG GCTGGTGGAA CAGTTGCAAC AGCGCGGTAT TTGCGTGGGG GTCGTATCGC GGGGATATGG TGGTAAGGCT GAATCTTATC CGCTGTTATT GTCGGCAGAT ACCACCACAG CACAGGCGGG TGATGAACCT GTGTTGATTT ATCAACGCAC TGATGCGCCT GTTGCGGTTT CTCCCGTGCG TTCTGATGCG ATAAAAGCCA TTCTGGCGCA ACACCCTGAT GTGCAGATCA TCGTAACCGA CGACGGTTTA CAGCATTACC GTCTGGCGCG TGATGTGGAA ATTGTCGTTA TTGATGGTGT GCGTCGCTTT GGCAATGGCT GGTGGTTGCC GGCGGGGCCA ATGCGTGAGC GAGCGGGGCG CTTAAAGTCG GTTGATGCGG TAATCGTCAA CGGTGGTGTC CCCCGCAGCG GTGAAATCCC CATGCATCTG CTGCCGGGTC AGGCGGTGAA TTTACGTACC GGTACGCGTT GTGACGTTGC TCAGCTTGAA CATGTGGTGG CGATGGCAGG GATTGGTCAT CCGCCGCGCT TTTTTGCCAC GCTGAAGATG TGTGGCGTAC AACCGGAAAA ATGTGTACCG CTGGCCGATC ATCAGTCTTT GAATCATGCG GATGTCAGCG CGTTGGTCAG CGCCGGGCAA ACGCTGGTAA TGACAGAAAA AGATGCGGTG AAATGCCGGG CCTTTGCAGA AGAAAATTGG TGGTATTTGC CTGTAGACGC ACAGCTTTCA GGTGATGAAC CAGCGAAACT GCTTGCGCAA CTAACCTCGC TGGCTTCTGG CAACTAG
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Protein sequence | MIEKIWSGES PLWRLLLPLS WLYGLVSGAI RLCYKLKLKR AWRAPVPVVV VGNLTAGGNG KTPVVVWLVE QLQQRGICVG VVSRGYGGKA ESYPLLLSAD TTTAQAGDEP VLIYQRTDAP VAVSPVRSDA IKAILAQHPD VQIIVTDDGL QHYRLARDVE IVVIDGVRRF GNGWWLPAGP MRERAGRLKS VDAVIVNGGV PRSGEIPMHL LPGQAVNLRT GTRCDVAQLE HVVAMAGIGH PPRFFATLKM CGVQPEKCVP LADHQSLNHA DVSALVSAGQ TLVMTEKDAV KCRAFAEENW WYLPVDAQLS GDEPAKLLAQ LTSLASGN
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