Gene EcSMS35_2152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2152 
Symbol 
ID6144607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2158861 
End bp2159178 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content56% 
IMG OID641617028 
Productheat shock protein HspQ 
Protein accessionYP_001744202 
Protein GI170679789 
COG category[S] Function unknown 
COG ID[COG3785] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02097] hemimethylated DNA binding domain 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.174968 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.392928 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGCCA GCAAATTCGG TATCGGCCAG CAGGTCCGCC ATTCCCTGTT AGGTTATCTC 
GGAGTGGTCG TGGATATCGA CCCGGTTTAT TCGCTCTCTG AACCGTCGCC TGATGAGCTG
GCGGTGAATG ACGAGCTTCG CGCCGCTCCG TGGTATCACG TGGTGATGGA GGACGATAAC
GGCCTACCGG TTCATACCTA CCTGGCTGAA GCCCAGCTAA GTAGCGAATT GCAGGATGAA
CATCCTGAAC AGCCATCCAT GGATGAGCTG GCGCAGACCA TCCGCAAACA ACTCCAGGCC
CCGCGTCTGC GTAACTAA
 
Protein sequence
MIASKFGIGQ QVRHSLLGYL GVVVDIDPVY SLSEPSPDEL AVNDELRAAP WYHVVMEDDN 
GLPVHTYLAE AQLSSELQDE HPEQPSMDEL AQTIRKQLQA PRLRN