Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2130 |
Symbol | torR |
ID | 6144708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 2138676 |
End bp | 2139368 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641617005 |
Product | DNA-binding transcriptional regulator TorR |
Protein accession | YP_001744180 |
Protein GI | 170682155 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACATC ACATTGTTAT TGTTGAAGAT GAACCGGTTA CCCAGGCGCG ATTACAATCC TACTTCACTC AGGAGGGGTA TACCGTTTCC GTTACGGCGA GCGGTGCCGG GCTGCGGGAA ATTATGCAGA ATCAGCCGGT GGATTTAATT CTGCTGGATA TCAATTTGCC CGATGAAAAT GGCCTGATGT TAACCCGCGC CCTGCGAGAA CGCTCAACGG TGGGGATTAT TCTGGTTACG GGACGCAGCG ATCGGATTGA CCGTATTGTT GGGCTGGAAA TGGGCGCAGA CGATTACGTC ACCAAACCGC TGGAACTGCG CGAACTGGTG GTACGAGTGA AAAATCTGCT CTGGCGAATC GACCTCGCGC GGCAGGCGCA ACCGCACACT CAGGACAACT GCTATCGCTT TGCGGGTTAT TGCCTGAATG TGTCGCGCCA TACGCTGGAG CGAGATGGCG AGCCGATTAA ACTGACCCGC GCAGAGTATG AAATGTTGGT GGCATTTGTG ACTAATCCGG GCGAAATTCT CAGCCGTGAA CGTCTGCTGC GTATGCTTTC TGCGCGTCGG GTGGAAAACC CTGACCTGCG CACCGTCGAT GTGTTAATTC GTCGTTTACG CCATAAACTC AGCGCGGATT TACTGGTGAC ACAACATGGC GAAGGTTATT TCTTAGCCGC TGATGTGTGC TGA
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Protein sequence | MPHHIVIVED EPVTQARLQS YFTQEGYTVS VTASGAGLRE IMQNQPVDLI LLDINLPDEN GLMLTRALRE RSTVGIILVT GRSDRIDRIV GLEMGADDYV TKPLELRELV VRVKNLLWRI DLARQAQPHT QDNCYRFAGY CLNVSRHTLE RDGEPIKLTR AEYEMLVAFV TNPGEILSRE RLLRMLSARR VENPDLRTVD VLIRRLRHKL SADLLVTQHG EGYFLAADVC
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