| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2030 |
|---|
| Symbol | |
|---|
| ID | 6143892 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 2051393 |
|---|
| End bp | 2052415 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641616906 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001744082 |
|---|
| Protein GI | 170680200 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1559] Predicted periplasmic solute-binding protein |
|---|
| TIGRFAM ID | [TIGR00247] conserved hypothetical protein, YceG family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000821549 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.00000424543 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG TGTTATTGAT TATCTTGTTA TTGCTGGTGG TACTGGGTAT CGCCGCTGGT
GTGGGCGTCT GGAAGGTTCG CCATCTTGCC GACAGCAAAT TGCTTATCAA AGAAGAGACG
ATATTTACCC TGAAGGCTGG GACCGGACGT CTGGCGCTCG GTGAACAGCT TTATGCCGAT
AAGATCATCA ATCGCCCACG GGTTTTCCAA TGGCTGCTGC GTATCGAACC GGATCTTTCT
CACTTTAAAG CCGGGACTTA CCGCTTTACA CCGCAGATGA CCGTGCGCGA GATGCTGAAA
TTGCTGGAAA GCGGTAAAGA AGCACAGTTC CCTCTGCGAC TGGTAGAAGG GATGCGTCTG
AGCGATTACC TCAAGCAATT GCGTGAGGCC CCGTATATCA AGCATACGCT GAGCGACGAT
AAGTACGCCA CCGTAGCGCA GGCACTTGAA CTGGAAAACC CAGAGTGGAT TGAAGGTTGG
TTCTGGCCAG ACACCTGGAT GTATACCGCC AATACCACCG ATGTCGCGTT ACTCAAGCGA
GCGCACAAGA AAATGGTGAA AGCGGTCGAT AGCGCCTGGG AAGGGCGTGC GGACGGTCTG
CCCTATAAAG ATAAAAACCA GCTGGTGACG ATGGCATCAA TTATCGAAAA AGAAACCGCC
GTTGCCAGTG AACGCGATCA GGTTGCCTCG GTATTTATCA ACCGGTTACG CATTGGTATG
CGCCTGCAGA CCGACCCGAC CGTGATTTAC GGGATGGGAG AGCGTTATAA TGGCAAACTT
TCTCGTGCAG ACCTGGAAAC GCCGACAGCG TATAACACCT ATACCATTAC CGGTTTGCCG
CCAGGTGCAA TAGCTACGCC GGGGGCGGAT TCGCTGAAGG CTGCTGCGCA TCCGGCAAAA
ACGCCGTATC TCTATTTTGT GGCCGATGGT AAAGGTGGTC ACACGTTTAA TACCAATCTT
GCCAGTCATA ACAAGTCTGT GCAGGATTAT CTGAAAGTGC TTAAGGAAAA AAATGCGCAG
TAA
|
|---|
| Protein sequence | MKKVLLIILL LLVVLGIAAG VGVWKVRHLA DSKLLIKEET IFTLKAGTGR LALGEQLYAD
KIINRPRVFQ WLLRIEPDLS HFKAGTYRFT PQMTVREMLK LLESGKEAQF PLRLVEGMRL
SDYLKQLREA PYIKHTLSDD KYATVAQALE LENPEWIEGW FWPDTWMYTA NTTDVALLKR
AHKKMVKAVD SAWEGRADGL PYKDKNQLVT MASIIEKETA VASERDQVAS VFINRLRIGM
RLQTDPTVIY GMGERYNGKL SRADLETPTA YNTYTITGLP PGAIATPGAD SLKAAAHPAK
TPYLYFVADG KGGHTFNTNL ASHNKSVQDY LKVLKEKNAQ
|
|---|
| |