Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_2025 |
Symbol | fhuE |
ID | 6145621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 2044976 |
End bp | 2047165 |
Gene Length | 2190 bp |
Protein Length | 729 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641616901 |
Product | ferric-rhodotorulic acid outer membrane transporter |
Protein accession | YP_001744077 |
Protein GI | 170682970 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000237263 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0000045764 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCTTTCGA CACAATTTAA CAGGGATAAT CAACATCAAG CTATCATCAA ATCGTCACTC CTTGCCGGTT GCATAGCACT GGCACTATTA CCTTCCGCCG CTTTTGCTGC ACCAGTCACT GAAGAAACGG TGATTGTTGA GGGTTCAGCC ACAGCCCCAG ATGATGGCGA AAATGATTAC AACGTAACGT CTACCTCTGC GGGTACAAAA ATGCAGATGA CTCAACGTGA TATTCCTCAG TCGGTCACTA TTGTTAGCCA GCAGCGGATG GAAGATCAGC AGTTACAAAC GCTGGGCGAA GTGATGGAAA ACACGCTGGG GATCAGCAAA AGTCAGGCGG ATTCCGATCG TGCTCTTTAT TATTCCCGCG GATTCCAGAT CGATAACTAT ATGGTTGATG GTATCCCCAC CTATTTTGAA TCGCGCTGGA ATCTGGGCGA CGCACTTTCT GATATGGCAC TGTTTGAACG CGTAGAAGTA GTGCGTGGCG CGACAGGCCT CATGACCGGG ACGGGTAATC CATCTGCGGC AATTAATATG GTTCGAAAAC ACGCGACCAG TCGTGAATTT AAAGGCGATG TCTCGGCGGA ATACGGTAGC TGGAACAAAG AACGGTATGT GGCGGATTTA CAAAGCCCAC TCACCGAAGA TGGTAAAATC CGCGCACGAA TTGTCGGCGG CTACCAGAAT AACGACTCAT GGCTGGACCG CTACAACAGT GAAAAGACCT TCTTCTCCGG CATTGTCGAT GCTGATTTAG GCGATCTTAC GATGCTTTCA GCCGGTTACG AATATCAGCG TATTGATGTT AATAGCCCAA CCTGGGGCGG TTTACCGCGC TGGAATACTG ATGGCAGCAG CAACAGTTAC GATCGCGCAC GCAGTACCGC ACCTGACTGG GCGTACAACG ATAAAGAGAT CAACAAGGTC TTTATGACCC TGAAGCAGCG GTTTGCTGAT ACCTGGCAAG CGACGCTGAA TGCCACCCAC TCTGAAGTCG AATTTGACAG CAAAATGATG TATGTCGATG CCTATGTAAA CAAAGCGGAT GGTATGCTGG TTGGGCCATA CAGTAATTAT GGACCTGGTT TTGATTATGT CGGCGGCACC GGTTGGAACA GCGGCAAACG TAAAGTTGAT GCGCTGGATT TGTTCGCTGA CGGTAGTTAT GAATTGTTTG GTCGTCAGCA CAATCTAATG TTTGGTGGCA GTTACAGCAA ACAAAACAAT CGTTACTTCA GTTCATGGGC CAACATCTTC CCGGATGAAA TTGGCAGTTT CTACAACTTT AATGGCAATT TCCCACAAAC CGACTGGTCA CCACAGAGCC TGGCGCAGGA CGATACCACA CATATGAAAT CGTTATATGC TGCCACTCGT GTCACCCTTG CCGATCCGCT GCATCTGATC CTCGGCGCTC GTTATACCAA CTGGCGGGTT GATACGCTGA CTTACAGCAT GGAGAAAAAC CACACCACGC CTTATGCTGG TCTGGTGTTT GACATCAATG ACAACTGGTC GACCTACGCC AGCTATACCT CTATTTTCCA GCCGCAAAAT GATCGTGACA GTTCAGGTAA ATATCTGACT CCAATCACCG GTAACAACTA CGAGTTGGGT CTGAAATCGG ACTGGATGAA TAGCCGTCTG ACCACCACGT TAGCCATCTT CCGTATTGAG CAGGATAATG TCGCTCAGTC CACCGGTACA CCTATCCCCG GCAGCAACGG CGAAACCGCC TATAAAGCGG TGGATGGGAC AGTCAGTAAA GGTGTGGAAT TTGAACTCAA CGGCGCAATT ACCGACAACT GGCAGCTGAC GTTTGGCGCA ACGCGCTATA TTGCAGAGGA TAACGAAGGA AACGCCGTTA ATCCTAATCT GCCACGCTCC ACGATTAAAA TGTTCACCAG CTATCGGTTG CCTGTCATGC TAGAGTTGAC GGTCGGCGGT GGTGTTAACT GGCAAAATCG CGTGTATACC GACACCGTGA CACCGTATGG CACCTTCCGC GCCGAGCAAG GTAGCTACGC GCTGGTGGAT CTCTTCACCC GCTACCAGGT GACGAAAAAC TTCTCGTTAC AGGGGAACGT CAATAACCTG TTCGACAAAA CCTACGATAC CAACGTGGAA GGTTCTATCG TCTACGGCGC ACCGCGTAAT TTCAGCATTA CCGGCACGTA TCAATTCTGA
|
Protein sequence | MLSTQFNRDN QHQAIIKSSL LAGCIALALL PSAAFAAPVT EETVIVEGSA TAPDDGENDY NVTSTSAGTK MQMTQRDIPQ SVTIVSQQRM EDQQLQTLGE VMENTLGISK SQADSDRALY YSRGFQIDNY MVDGIPTYFE SRWNLGDALS DMALFERVEV VRGATGLMTG TGNPSAAINM VRKHATSREF KGDVSAEYGS WNKERYVADL QSPLTEDGKI RARIVGGYQN NDSWLDRYNS EKTFFSGIVD ADLGDLTMLS AGYEYQRIDV NSPTWGGLPR WNTDGSSNSY DRARSTAPDW AYNDKEINKV FMTLKQRFAD TWQATLNATH SEVEFDSKMM YVDAYVNKAD GMLVGPYSNY GPGFDYVGGT GWNSGKRKVD ALDLFADGSY ELFGRQHNLM FGGSYSKQNN RYFSSWANIF PDEIGSFYNF NGNFPQTDWS PQSLAQDDTT HMKSLYAATR VTLADPLHLI LGARYTNWRV DTLTYSMEKN HTTPYAGLVF DINDNWSTYA SYTSIFQPQN DRDSSGKYLT PITGNNYELG LKSDWMNSRL TTTLAIFRIE QDNVAQSTGT PIPGSNGETA YKAVDGTVSK GVEFELNGAI TDNWQLTFGA TRYIAEDNEG NAVNPNLPRS TIKMFTSYRL PVMLELTVGG GVNWQNRVYT DTVTPYGTFR AEQGSYALVD LFTRYQVTKN FSLQGNVNNL FDKTYDTNVE GSIVYGAPRN FSITGTYQF
|
| |