Gene EcSMS35_2004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2004 
Symbol 
ID6144616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2024785 
End bp2025246 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content42% 
IMG OID641616880 
Producthypothetical protein 
Protein accessionYP_001744056 
Protein GI170683204 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.425505 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAGG ACAGTAAAGT TTTCTTTCGT ATATTCTTCG GTATCGGTCT GGTACTGATC 
CTCATTTCTG TTGTTATCTT TTATAACCAG TTCACCTATA GCAAAGACGC GATTCATACT
GAAGGCGTCA TTGTTGATAC CGTCTGGCAC TCCAGTCATT CTCATCGCAC GGGTAAAAAT
GGTTCGTGGT ATCCCGTCGT TGCCTTTCGT CCGACGCCAG ATTACACGCT AATTTTCAAT
TCGAGTATTG GCAGCGATTT TTATGAAGAC AGCGAAGGCG ATAAAGTTAA TGTTTATTAT
TCTCCAGGAC ATCCTGAAAA GGCTGAGATA AATAACCCGT GGGTTAATTT TTTTAAATGG
GGGTTTATCG GCATTATGGG CGTTATTTTT ATCGCCGTCG GTTTATTAAT CAGTATGCCC
TCCTCTAAAA AGACACGCAG GAAACGGAAG TCCCGCCCAT GA
 
Protein sequence
MSQDSKVFFR IFFGIGLVLI LISVVIFYNQ FTYSKDAIHT EGVIVDTVWH SSHSHRTGKN 
GSWYPVVAFR PTPDYTLIFN SSIGSDFYED SEGDKVNVYY SPGHPEKAEI NNPWVNFFKW
GFIGIMGVIF IAVGLLISMP SSKKTRRKRK SRP